4,615 results on '"MURPHY JJ"'
Search Results
2. Exploring spatio-temporal changes in coastal recreational fisheries and potential links to extreme weather events.
- Author
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Ochwada-Doyle FA, Miles N, Hughes JM, Murphy JJ, Lowry MB, West L, and Taylor MD
- Subjects
- Animals, Australia, Recreation, Ecosystem, Spatio-Temporal Analysis, Climate Change, Fishes physiology, Humans, SARS-CoV-2 isolation & purification, Fisheries, Extreme Weather, COVID-19 epidemiology
- Abstract
Extreme weather events across coastal environments are expected to increase in frequency under predicted climate change scenarios. These events can impact coastal recreational fisheries and their supporting ecosystems by influencing the productivity of fish stocks or altering behaviours and decision-making among fishers. Using off-site telephone/diary survey data on estuarine and oceanic recreational fishing activity in eastern Australia, we analyse interannual and geographic variability in bream (Acanthopagrus spp) and snapper (Chrysophrys auratus) catch, total effort and total catch per unit effort (CPUE) through a period (2013/2014, 2017/2018 and 2019/2020) that encompassed severe drought, bushfires and flooding. Interacting spatial and temporal differences were detected for bream and may reflect spatial variation in the intensity and extent of some of the extreme weather events. The catch of snapper did not change temporally, providing little evidence that this species' catch may be influenced by the extreme weather events. Independent bioregional and temporal effects on effort were detected, while CPUE only showed significant bioregional differences. Although adverse conditions created by the extreme weather events may have dissuaded fisher participation and impacted effort, we propose that the observed temporal patterns in effort reflect the early influence of socio-economic changes brought on by the COVID-19 pandemic on coastal recreational fishing, over and above the impacts of extreme weather events. This study demonstrates how interrelated ecological, social and economic factors can shape coastal recreational fisheries and facilitates development of management strategies to address future threats to the sector., Competing Interests: NO authors have competing interests., (Copyright: © 2024 Ochwada-Doyle et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Published
- 2024
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- View/download PDF
3. Land cover and space use influence coyote carnivory: evidence from stable-isotope analysis.
- Author
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Webster SC, Hinton JW, Chamberlain MJ, Murphy JJ, and Beasley JC
- Subjects
- Animals, Carbon Isotopes analysis, Carnivory, Diet, Territoriality, Southeastern United States, Feeding Behavior physiology, Coyotes physiology, Nitrogen Isotopes analysis
- Abstract
For many species, the relationship between space use and diet composition is complex, with individuals adopting varying space use strategies such as territoriality to facilitate resource acquisition. Coyotes ( Canis latrans ) exhibit two disparate types of space use; defending mutually exclusive territories (residents) or moving nomadically across landscapes (transients). Resident coyotes have increased access to familiar food resources, thus improved foraging opportunities to compensate for the energetic costs of defending territories. Conversely, transients do not defend territories and are able to redirect energetic costs of territorial defense towards extensive movements in search of mates and breeding opportunities. These differences in space use attributed to different behavioral strategies likely influence foraging and ultimately diet composition, but these relationships have not been well studied. We investigated diet composition of resident and transient coyotes in the southeastern United States by pairing individual space use patterns with analysis of stable carbon (δ
13 C) and nitrogen (δ15 N) isotope values to assess diet. During 2016-2017, we monitored 41 coyotes (26 residents, 15 transients) with GPS radio-collars along the Savannah River area in the southeastern United States. We observed a canopy effect on δ13 C values and little anthropogenic food in coyote diets, suggesting13 C enrichment is likely more influenced by reduced canopy cover than consumption of human foods. We also observed other land cover effects, such as agricultural cover and road density, on δ15 N values as well as reduced space used by coyotes, suggesting that cover types and localized, resident-like space use can influence the degree of carnivory in coyotes. Finally, diets and niche space did not differ between resident and transient coyotes despite differences observed in the proportional contribution of potential food sources to their diets. Although our stable isotope mixing models detected differences between the diets of resident and transient coyotes, both relied mostly on mammalian prey (52.8%, SD = 15.9 for residents, 42.0%, SD = 15.6 for transients). Resident coyotes consumed more game birds (21.3%, SD = 11.6 vs 13.7%, SD = 8.8) and less fruit (10.5%, SD = 6.9 vs 21.3%, SD = 10.7) and insects (7.2%, SD = 4.7 vs 14.3%, SD = 8.5) than did transients. Our findings indicate that coyote populations fall on a feeding continuum of omnivory to carnivory in which variability in feeding strategies is influenced by land cover characteristics and space use behaviors., Competing Interests: The authors declare that they have no competing interests., (© 2024 Webster et al.)- Published
- 2024
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4. Just say 'no' to drugs as a first treatment for child problems
- Author
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Duncan, BL, Sparks, JA, Murphy, JJ, and Miller, SD
- Published
- 2007
5. Behavioral Effects of Ecotourism on Green Sea Turtles
- Author
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Haden, Blake, Jensen, Bronwyn, Tyska, Drew, Lockwood, Jake, Murphy, JJ, Clark, Riley, Avelar, Rori, and Bigelow, Bill
- Subjects
ComputingMilieux_COMPUTERSANDEDUCATION ,ComputingMilieux_MISCELLANEOUS - Abstract
Poster created by students of The Island School semester research class of Fall 2018
- Published
- 2022
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6. Create a culture of experiments in environmental programs.
- Author
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Ferraro PJ, Cherry TL, Shogren JF, Vossler CA, Cason TN, Flint HB, Hochard JP, Johansson-Stenman O, Martinsson P, Murphy JJ, Newbold SC, Thunström L, van Soest D, van 't Veld K, Dannenberg A, Loewenstein GF, and van Boven L
- Subjects
- Learning
- Abstract
Organizations need a better "learning by doing" approach.
- Published
- 2023
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7. RNA-Binding Proteins and Their Emerging Roles in Cancer: Beyond the Tip of the Iceberg.
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Murphy JJ, Surendranath K, and Kanagaraj R
- Subjects
- Humans, RNA-Binding Proteins genetics, RNA-Binding Proteins metabolism, Neoplasms genetics, Neoplasms metabolism
- Abstract
RNA-binding proteins (RBPs) represent a large family of proteins with an extensive array of roles that contribute to coordinating and directing multiple functions in RNA metabolism and transcription [...].
- Published
- 2023
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8. A deep learning workflow for quantification of micronuclei in DNA damage studies in cultured cancer cell lines: A proof of principle investigation.
- Author
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Panchbhai A, Savash Ishanzadeh MC, Sidali A, Solaiman N, Pankanti S, Kanagaraj R, Murphy JJ, and Surendranath K
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- Humans, Workflow, Micronucleus Tests methods, DNA Damage, Cell Line, Deep Learning, Neoplasms
- Abstract
The cytokinesis block micronucleus assay is widely used for measuring/scoring/counting micronuclei, a marker of genome instability in cultured and primary cells. Though a gold standard method, this is a laborious and time-consuming process with person-to-person variation observed in quantification of micronuclei. We report in this study the utilisation of a new deep learning workflow for detection of micronuclei in DAPI stained nuclear images. The proposed deep learning framework achieved an average precision of >90% in detection of micronuclei. This proof of principle investigation in a DNA damage studies laboratory supports the idea of deploying AI powered tools in a cost-effective manner for repetitive and laborious tasks with relevant computational expertise. These systems will also help improving the quality of data and wellbeing of researchers., Competing Interests: Declaration of Competing Interest The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
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9. Antitumour activity of neratinib in patients with HER2-mutant advanced biliary tract cancers.
- Author
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Harding JJ, Piha-Paul SA, Shah RH, Murphy JJ, Cleary JM, Shapiro GI, Quinn DI, Braña I, Moreno V, Borad M, Loi S, Spanggaard I, Park H, Ford JM, Arnedos M, Stemmer SM, de la Fouchardiere C, Fountzilas C, Zhang J, DiPrimeo D, Savin C, Duygu Selcuklu S, Berger MF, Eli LD, Meric-Bernstam F, Jhaveri K, Solit DB, and Abou-Alfa GK
- Subjects
- Humans, Female, Receptor, ErbB-2 genetics, Diarrhea chemically induced, Antineoplastic Combined Chemotherapy Protocols adverse effects, Treatment Outcome, Quinolines pharmacology, Quinolines therapeutic use, Biliary Tract Neoplasms drug therapy, Biliary Tract Neoplasms genetics, Biliary Tract Neoplasms chemically induced, Breast Neoplasms etiology
- Abstract
HER2 mutations are infrequent genomic events in biliary tract cancers (BTCs). Neratinib, an irreversible, pan-HER, oral tyrosine kinase inhibitor, interferes with constitutive receptor kinase activation and has activity in HER2-mutant tumours. SUMMIT is an open-label, single-arm, multi-cohort, phase 2, 'basket' trial of neratinib in patients with solid tumours harbouring oncogenic HER2 somatic mutations (ClinicalTrials.gov: NCT01953926). The primary objective of the BTC cohort, which is now complete, is first objective response rate (ORR) to neratinib 240 mg orally daily. Secondary objectives include confirmed ORR, clinical benefit rate, progression-free survival, duration of response, overall survival, safety and tolerability. Genomic analyses were exploratory. Among 25 treatment-refractory patients (11 cholangiocarcinoma, 10 gallbladder, 4 ampullary cancers), the ORR is 16% (95% CI 4.5-36.1%). The most common HER2 mutations are S310F (n = 11; 48%) and V777L (n = 4; 17%). Outcomes appear worse for ampullary tumours or those with co-occurring oncogenic TP53 and CDKN2A alterations. Loss of amplified HER2 S310F and acquisition of multiple previously undetected oncogenic co-mutations are identified at progression in one responder. Diarrhoea is the most common adverse event, with any-grade diarrhoea in 14 patients (56%). Although neratinib demonstrates antitumour activity in patients with refractory BTC harbouring HER2 mutations, the primary endpoint was not met and combinations may be explored., (© 2023. The Author(s).)
- Published
- 2023
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10. Veteran and Staff Experience from a Pilot Program of Health Care System-Distributed Wearable Devices and Data Sharing.
- Author
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Saleem JJ, Wilck NR, Murphy JJ, and Herout J
- Subjects
- Delivery of Health Care, Humans, Information Dissemination, Pilot Projects, United States, United States Department of Veterans Affairs, Veterans, Wearable Electronic Devices
- Abstract
Objective: The growing trend to use wearable devices to track activity and health data has the potential to positively impact the patient experience with their health care at home and with their care team. As part of a pilot program, the U.S. Department of Veterans Affairs (VA) distributed Fitbits to Veterans through four VA medical centers. Our objective was to assess the program from both Veterans' and clinicians' viewpoints. Specifically, we aimed to understand barriers to Fitbit setup and use for Veterans, including syncing devices with a VA mobile application (app) to share data, and assess the perceived value of the device functions and ability to share information from the Fitbit with their care team. In addition, we explored the clinicians' perspective, including how they expected to use the patient-generated health data (PGHD)., Methods: We performed semi-structured interviews with 26 Veterans and 16 VA clinicians to assess the program. Responses to each question were summarized in order of frequency of occurrence across participants and audited by an independent analyst for accuracy., Results: Our findings reveal that despite setup challenges, there is support for the use of Fitbits to engage Veterans and help manage their health. Clinicians believed there were benefits for having Veterans use the Fitbits and expected to use the PGHD in a variety of ways as part of the Veterans' care plans, including monitoring progress toward health behavior goals. Veterans were overwhelmingly enthusiastic about using the Fitbits; this enthusiasm seems to extend beyond the 3 month "novelty period.", Conclusion: The pilot program for distributing Fitbits to Veterans appears to be successful from both Veterans' and clinicians' perspectives and suggests that expanded use of wearable devices should be considered. Future studies will need to carefully consider how to incorporate the PGHD into the electronic health record and clinical workflow., Competing Interests: None declared., (Thieme. All rights reserved.)
- Published
- 2022
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11. 'ONE STOP' CHEST PAIN CLINICS: DO THEY WORK?
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Murphy, JJ, Bossingham, and Hetherington, P
- Published
- 1997
12. AU-Rich Element RNA Binding Proteins: At the Crossroads of Post-Transcriptional Regulation and Genome Integrity.
- Author
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Sidali A, Teotia V, Solaiman NS, Bashir N, Kanagaraj R, Murphy JJ, and Surendranath K
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- 3' Untranslated Regions genetics, Animals, Humans, Adenine metabolism, Genome genetics, RNA Processing, Post-Transcriptional genetics, RNA-Binding Proteins genetics, Uridine genetics
- Abstract
Genome integrity must be tightly preserved to ensure cellular survival and to deter the genesis of disease. Endogenous and exogenous stressors that impose threats to genomic stability through DNA damage are counteracted by a tightly regulated DNA damage response (DDR). RNA binding proteins (RBPs) are emerging as regulators and mediators of diverse biological processes. Specifically, RBPs that bind to adenine uridine (AU)-rich elements (AREs) in the 3' untranslated region (UTR) of mRNAs (AU-RBPs) have emerged as key players in regulating the DDR and preserving genome integrity. Here we review eight established AU-RBPs (AUF1, HuR, KHSRP, TIA-1, TIAR, ZFP36, ZFP36L1, ZFP36L2) and their ability to maintain genome integrity through various interactions. We have reviewed canonical roles of AU-RBPs in regulating the fate of mRNA transcripts encoding DDR genes at multiple post-transcriptional levels. We have also attempted to shed light on non-canonical roles of AU-RBPs exploring their post-translational modifications (PTMs) and sub-cellular localization in response to genotoxic stresses by various factors involved in DDR and genome maintenance. Dysfunctional AU-RBPs have been increasingly found to be associated with many human cancers. Further understanding of the roles of AU-RBP
S in maintaining genomic integrity may uncover novel therapeutic strategies for cancer.- Published
- 2021
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13. Murphy JJ, Heptinstall S, Mitchell JR. Randomized double-blind placebo-controlled trial of feverfew in migraine preventionLancet 1988 23; 2(8604): 189–192
- Published
- 1998
14. An experimental test of fundraising appeals targeting donor and recipient benefits.
- Author
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List JA, Murphy JJ, Price MK, and James AG
- Subjects
- Cost-Benefit Analysis, Economics, Behavioral, Humans, Models, Psychological, Altruism, Charities, Fund Raising, Motivation, Social Behavior
- Abstract
We partnered with Alaska's Pick.Click.Give. programme to implement a statewide natural field experiment with 540,000 Alaskans designed to examine two of the main motivations for charitable giving: concerns for the benefits to self (impure altruism or 'warm glow') or concerns for the benefits to others (pure altruism). Our empirical results highlight the relative importance of appeals to self: individuals who received such an appeal were 6.6% more likely to give and gave 23% more than counterparts in the control group. Yet, a message that instead appealed to recipient benefits (motivated by altruism) had no statistically significant effect on average donations relative to the control group. We also find evidence of long-run effects of warm-glow appeals in the subsequent year. Our results have import for theoreticians and empiricists interested in modelling charitable giving as well as practitioners and policymakers., (© 2021. The Author(s), under exclusive licence to Springer Nature Limited.)
- Published
- 2021
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15. "Getting Ireland Active"-Application of a Systems Approach to Increase Physical Activity in Ireland Using the GAPPA Framework.
- Author
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Murphy JJ, Mansergh F, Murphy MH, Murphy N, Cullen B, O'Brien S, Finn S, O'Donoghue G, Barry N, O'Shea S, Leyden KM, Smyth P, Cooper J, Bengoechea EG, Cavill N, Milat AJ, Bauman AE, and Woods CB
- Subjects
- Female, Humans, Ireland, Male, Systems Analysis, Exercise, Health Promotion
- Abstract
Physical activity (PA) promotion is a complex challenge, with the Global Action Plan on Physical Activity (GAPPA) endorsing a systems approach and recommending countries assess existing areas of progress which can be strengthened. This paper reports a process facilitating a systems approach for identifying current good practice and gaps for promoting PA in Ireland. Elements of participatory action research were enabled through 3 stages: (1) aligning examples of actions from Irish policy documents (n = 3) to the GAPPA, (2) workshop with stakeholders across multiple sectors, and (3) review of outputs. Data collected through the workshop were analyzed using a deductive thematic analysis guided by the GAPPA. The policy context in Ireland aligns closely to the GAPPA with the creation of Active Systems the most common strategic objective across policy documents. Forty participants (50% male) took part in the systems approach workshop, which after revision resulted in 80 examples of good practice and 121 actions for greater impact. A pragmatic and replicable process facilitating a systems approach was adopted and showed current Irish policy and practices align with the GAPPA "good practices." The process provides existing areas of progress which can be strengthened, as well as the policy opportunities and practice gaps.
- Published
- 2021
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16. Correction: Do truth-telling oaths improve honesty in crowd-working?
- Author
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Jacquemet N, James AG, Luchini S, Murphy JJ, and Shogren JF
- Abstract
[This corrects the article DOI: 10.1371/journal.pone.0244958.].
- Published
- 2021
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17. Nickel-Catalyzed Enantioselective Synthesis of Pre-Differentiated Homoallylic syn - or anti -1,2-Diols from Aldehydes and Dienol Ethers.
- Author
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Davies TQ, Murphy JJ, Dousset M, and Fürstner A
- Abstract
Nickel catalysis allied with cyclodiphosphazane or VAPOL-derived phosphoramidite ligands provides selective access to monoprotected vicinal diols by reductive coupling of dienol ethers and aldehydes. The observed regioselectivity is unprecedented, in that the diene reacts at the least nucleophilic and most hindered C atom that is attached to the oxygen substituent rather than at the terminal position. Notably, both syn and anti diastereomers of the products can be accessed depending on the configuration of the diene partner with usually excellent diastereo- and enantioselectivity.
- Published
- 2021
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18. P825Remote monitoring of implantable loop recorders, when is more too much?
- Author
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Pounds, G., primary, Murphy, JJ., additional, Wilson, DW., additional, and Hungin, A P S, additional
- Published
- 2017
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19. P824Real Care: minimising diagnostic time in the implantable loop recorder population
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Pounds, G., primary, Murphy, JJ., additional, Hungin, A P S, additional, Wilson, DW., additional, and Curry, JK., additional
- Published
- 2017
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20. Do truth-telling oaths improve honesty in crowd-working?
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Jacquemet N, James AG, Luchini S, Murphy JJ, and Shogren JF
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Deception, Female, Humans, Male, Middle Aged, Surveys and Questionnaires, Young Adult, Codes of Ethics, Crowdsourcing economics, Crowdsourcing methods, Truth Disclosure
- Abstract
This study explores whether an oath to honesty can reduce both shirking and lying among crowd-sourced internet workers. Using a classic coin-flip experiment, we first confirm that a substantial majority of Mechanical Turk workers both shirk and lie when reporting the number of heads flipped. We then demonstrate that lying can be reduced by first asking each worker to swear voluntarily on his or her honor to tell the truth in subsequent economic decisions. Even in this online, purely anonymous environment, the oath significantly reduced the percent of subjects telling "big" lies (by roughly 27%), but did not affect shirking. We also explore whether a truth-telling oath can be used as a screening device if implemented after decisions have been made. Conditional on flipping response, MTurk shirkers and workers who lied were significantly less likely to agree to an ex-post honesty oath. Our results suggest oaths may help elicit more truthful behavior, even in online crowd-sourced environments., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2021
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21. In Response to "Association Between Youth Smoking, Electronic Cigarette Use, and COVID-19".
- Author
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Camacho OM and Murphy JJ
- Subjects
- Adolescent, Humans, SARS-CoV-2, Smoking, COVID-19, Electronic Nicotine Delivery Systems, Vaping
- Published
- 2021
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22. Delayed Presentation of Meconium Ileus in an Infant With Cystic Fibrosis.
- Author
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Lahiri T, Sullivan JS, Sartorelli KH, and Murphy JJ
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- Cholestasis prevention & control, Delayed Diagnosis, Female, Fish Oils therapeutic use, Humans, Infant, Newborn, Lipids administration & dosage, Meconium Ileus therapy, Olive Oil therapeutic use, Parenteral Nutrition, Soybean Oil therapeutic use, Triglycerides administration & dosage, Cystic Fibrosis diagnosis, Meconium Ileus diagnosis
- Abstract
Although infants with meconium ileus usually present with apparent symptoms shortly after birth, the diagnosis of meconium ileus and cystic fibrosis (CF) may be delayed, awaiting newborn screening (NBS) results. We present the case of an 11-day-old term girl with delayed passage of meconium at 48 hours who had 2 subsequent small meconium stools over the following week. There was a normal feeding history and no signs of abdominal distension or distress. She then presented with an acute abdomen, decompensated shock, bowel perforation, and peritonitis, requiring multiple intestinal surgeries. Her NBS for CF was positive, and CF was ultimately confirmed with mutation analysis. Her course was complicated by prolonged parenteral feedings and mechanical ventilation via tracheostomy. The infant was managed with soy oil, medium chain triglycerides, olive oil, fish oil lipids and experienced only transaminitis without cholestasis and no chronic liver sequelae, with subsequent normalization of her transaminases without treatment. Because her only symptom was decreased stool output and NBS results were unavailable, the CF diagnosis was delayed until she presented in extremis. Delayed meconium passage and decreased stool output during the first week of life should lead to suspicion and additional evaluation for CF while awaiting NBS results. Careful monitoring is indicated to prevent serious, life-threatening complications. The use of soy oil, medium chain triglycerides, olive oil, fish oil lipids for infants requiring prolonged parenteral nutrition may also be considered proactively to prevent cholestasis, particularly for high risk groups., Competing Interests: POTENTIAL CONFLICT OF INTEREST: The authors have indicated they have no potential conflicts of interest to disclose., (Copyright © 2020 by the American Academy of Pediatrics.)
- Published
- 2020
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23. Veterans' response to an automated text messaging protocol during the COVID-19 pandemic.
- Author
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Saleem JJ, Read JM, Loehr BM, Frisbee KL, Wilck NR, Murphy JJ, Vetter BM, and Herout J
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- Betacoronavirus, COVID-19, Decision Trees, Humans, Mobile Applications, SARS-CoV-2, Telemedicine, Triage, United States, United States Department of Veterans Affairs, Coronavirus Infections diagnosis, Pandemics, Pneumonia, Viral diagnosis, Text Messaging, Veterans
- Abstract
The US Department of Veterans Affairs (VA) is using an automated short message service application named "Annie" as part of its coronavirus disease 2019 (COVID-19) response with a protocol for coronavirus precautions, which can help the veteran monitor symptoms and can advise the veteran when to contact his or her VA care team or a nurse triage line. We surveyed 1134 veterans on their use of the Annie application and coronavirus precautions protocol. Survey results support what is likely a substantial resource savings for the VA, as well as non-VA community healthcare. Moreover, the majority of veterans reported at least 1 positive sentiment (felt more connected to VA, confident, or educated and/or felt less anxious) by receiving the protocol messages. The findings from this study have implications for other healthcare systems to help manage a patient population during the coronavirus pandemic., (Published by Oxford University Press on behalf of the American Medical Informatics Association 2020. This work is written by US Government employees and is in the public domain in the US.)
- Published
- 2020
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24. Chagosensine: A Riddle Wrapped in a Mystery Inside an Enigma.
- Author
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Heinrich M, Murphy JJ, Ilg MK, Letort A, Flasz JT, Philipps P, and Fürstner A
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- Alkenes chemical synthesis, Alkenes chemistry, Alkynes chemical synthesis, Alkynes chemistry, Biological Products chemistry, Catalysis, Chemistry Techniques, Synthetic, Cobalt chemistry, Cyclization, Furans chemical synthesis, Furans chemistry, Lactones chemical synthesis, Lactones chemistry, Macrolides chemistry, Oxidation-Reduction, Stereoisomerism, Biological Products chemical synthesis, Macrolides chemical synthesis
- Abstract
The marine macrolide chagosensine is supposedly distinguished by a ( Z,Z )-configured 1,3-chlorodiene contained within a highly strained 16-membered lactone ring, which also incorporates two trans -2,5-disubstituted tetrahydrofuran (THF) rings; this array is unique. After our initial synthesis campaign had shown that the originally proposed structure is incorrect, the published data set was critically revisited to identify potential mis-assignments. The "northern" THF ring and the anti -configured diol in the "southern" sector both seemed to be sites of concern, thus making it plausible that a panel of eight diastereomeric chagosensine-like compounds would allow the puzzle to be solved. To meet the challenge, the preparation of the required building blocks was optimized, and a convergent strategy for their assembly was developed. A key role was played by the cobalt-catalyzed oxidative cyclization of alken-5-ol derivatives ("Mukaiyama cyclization"), which is shown to be exquisitely chemoselective for terminal alkenes, leaving even terminal alkynes (and other sites of unsaturation) untouched. Likewise, a palladium-catalyzed alkyne alkoxycarbonylation reaction with formation of an α-methylene-γ-lactone proved instrumental, which had not found application in natural product synthesis before. Further enabling steps were a nickel-catalyzed "Tamaru-type" homocrotylation, stereodivergent aldehyde homologations, radical hydroindation, and palladium-catalyzed alkyne-1,2-bis-stannation. The different building blocks were assembled in a serial fashion to give the idiosyncratic chlorodienes by an unprecedented site-selective Stille coupling followed by copper-mediated tin/chlorine exchange. The macrolactones were closed under forcing Yamaguchi conditions, and the resulting products were elaborated into the targeted compound library. Yet, only one of the eight diastereomers turned out to be stable in the solvent mixture that had been used to analyze the natural product; all other isomers were prone to ring opening and/or ring expansion. In addition to this stability issue, our self-consistent data set suggests that chagosensine has almost certainly little to do with the structure originally proposed by the isolation team.
- Published
- 2020
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25. Early Career Professionals' (Researchers, Practitioners, and Policymakers) Role in Advocating, Disseminating, and Implementing the Global Action Plan on Physical Activity: ISPAH Early Career Network View.
- Author
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Direito A, Murphy JJ, Mclaughlin M, Mair J, Mackenzie K, Kamada M, Sutherland R, Montgomery S, and Shilton T
- Subjects
- Humans, Exercise physiology, Health Promotion methods, Research Personnel
- Abstract
Increasing population levels of physical activity (PA) can assist in achieving the United Nations sustainable development goals, benefiting multiple sectors and contributing to global prosperity. Practices and policies to increase PA levels exist at the subnational, national, and international levels. In 2018, the World Health Organization launched the first Global Action Plan on Physical Activity (GAPPA). The GAPPA provides guidance through a framework of effective and feasible policy actions for increasing PA, and requires engagement and advocacy from a wide spectrum of stakeholders for successful implementation of the proposed actions. Early career professionals, including researchers, practitioners, and policymakers, can play a major role with helping "all people being regularly active" by contributing to 4 overarching areas: (1) generation-of evidence, (2) dissemination-of key messages and evidence, (3) implementation-of the evidence-based actions proposed in the GAPPA, and (4) contributing to advocacy for robust national action plans on PA. The contribution of early career professionals can be achieved through 5 pathways: (1) research, (2) workplace/practice, (3) business, (4) policy, and (5) professional and public opinion. Recommendations of how early career professionals can contribute to the generation, dissemination, and implementation of the evidence and actions proposed by the GAPPA are provided.
- Published
- 2019
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26. Prostate Cancer: The Role of Inflammation and Chemokines.
- Author
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Rani A, Dasgupta P, and Murphy JJ
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- Animals, Cell Movement, Disease Progression, Humans, Inflammation pathology, Male, Prostatic Neoplasms immunology, Tumor Microenvironment immunology, Chemokines physiology, Inflammation physiopathology, Prostatic Neoplasms pathology
- Abstract
Prostate cancer (PC) is a leading cause of death in men. Inflammation is one of the initiating processes whereby cells are trafficked into the tumor microenvironment by specific cytokines termed chemokines. This recruitment is complex and involves diverse leukocyte subsets with procancer and anticancer functions. Chemokines promote/abrogate proliferation of cancerous cells, block/aid apoptosis, and are instrumental/detrimental in cancer cell migration required for metastasis. Chemokines guide the release/transport of immune cells that serve as chaperones at sites of inflammation, and after subsequent activation, they lead to an immune response. The variety of immune cells recruited at the site of tumor initiation possess unique functions, and the plethora of chemokines released by each cell derived from a progenitor cell activated under a defined set of conditions dictates its specific role in cancer progression/regression. Geographic consequences that govern the climate and endemic diseases, along with the associated evolutionary effects that at times protect populations from one disease, could lead to genetic variations that determine a role for ethnicity and race in PC risk and susceptibility. Dysregulated expression or an imbalance in the homeostatic mechanisms associated with chemokines is implicated in PC. This review discusses the role of inflammation and chemokines in PC., (Copyright © 2019 American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.)
- Published
- 2019
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27. Novel Transhepatic Percutaneous Approach for Left Atrial Appendage Occlusion Using a Watchman Device.
- Author
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Huang HD, Murphy JJ, Sharma A, Kavinsky CJ, and Poulin MF
- Subjects
- Atrial Fibrillation diagnosis, Atrial Fibrillation physiopathology, Atrial Function, Left, Female, Humans, Middle Aged, Prosthesis Design, Punctures, Treatment Outcome, Atrial Appendage diagnostic imaging, Atrial Appendage physiopathology, Atrial Fibrillation therapy, Cardiac Catheterization instrumentation, Catheterization, Peripheral, Hepatic Veins diagnostic imaging
- Published
- 2019
- Full Text
- View/download PDF
28. Interactive Visualization to Facilitate Monitoring Longitudinal Survey Data and Paradata
- Author
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Murphy JJ, Duprey MA, Chew RF, Biemer PP, Harris KM, and Halpern CT
- Abstract
Surveys often require monitoring during data collection to ensure progress in meeting goals or to evaluate the interim results of an embedded experiment. Under complex designs, the amount of data available to monitor may be overwhelming and the production of reports and charts can be costly and time consuming. This is especially true in the case of longitudinal surveys, where data may originate from multiple waves. Other such complex scenarios include adaptive and responsive designs, which were developed to act on the results of such monitoring to implement prespecified options or alternatives in protocols. This paper discusses the development of an interactive web-based data visualization tool, the Adaptive Total Design (ATD) Dashboard, which we designed to provide a wide array of survey staff with the information needed to monitor data collection daily. The dashboard was built using the R programming language and Shiny framework and provides users with a wide range of functionality to quickly assess trends. We present the structure of the data used to populate the dashboard, its design, and the process for hosting it on the web. Furthermore, we provide guidance on graphic design, data taxonomy, and software decisions that can help guide others in the process of developing their own data collection monitoring systems. To illustrate the benefits of the dashboard, we present examples from the National Longitudinal Study of Adolescent to Adult Health (Add Health). We also discuss features of the dashboard to be developed for future waves of Add Health., (© 2019 Research Triangle Institute. All rights reserved.)
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- 2019
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29. What Psychosocial Factors Determine the Physical Activity Patterns of University Students?
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Murphy JJ, MacDonncha C, Murphy MH, Murphy N, Nevill AM, and Woods CB
- Subjects
- Adult, Cluster Analysis, Female, Humans, Male, Surveys and Questionnaires, Universities, Young Adult, Exercise psychology, Psychology methods, Students psychology
- Abstract
Background : Although levels of physical activity (PA) have been researched, no information on how university students organize their PA across different life domains is available. The purpose of this study is to explore if and how students organize their PA across transport and recreational domains, and to identify the psychosocial factors related to these patterns. Methods : Students from 31 Irish universities completed a supervised online survey measuring participant characteristics, psychosocial factors, and PA. Two-step cluster analysis was used to identify specific PA patterns in students. Binary logistic regressions identified factors associated with cluster membership while controlling for age, sex, household income, and perceived travel time to a university. Results : Analysis was performed on 6951 students (50.7% male; 21.51 [5.55] y). One Low Active cluster emerged. Four clusters containing a form of PA emerged including Active Commuters, Active in University, Active Outside University, and High Active. Increases in motivation and planning improved the likelihood of students being categorized in a cluster containing PA. Conclusion : One size does not fit all when it comes to students PA engagement, with 5 patterns identified. Health professionals are advised to incorporate strategies for increasing students' motivation, action planning, and coping planning into future PA promotion efforts.
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- 2019
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30. Student Activity and Sport Study Ireland: Protocol for a Web-Based Survey and Environmental Audit Tool for Assessing the Impact of Multiple Factors on University Students' Physical Activity.
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Murphy JJ, Woods CB, Murphy MH, Murphy N, Byrne N, and Mac Donncha C
- Abstract
Background: Increasing proportions of the global population transition through a university setting, a setting associated with engagement in behaviors that diminish health such as high levels of physical inactivity. Increasing physical activity (PA) is a key element of health promotion strategies in many countries, but a better understanding of students' PA and how it is associated with personal, behavioral, and environmental factors is needed. Studies provide protocols to collect information regarding these factors separately; however, none have developed a validated systematic approach to gather information pertaining to all across a whole country., Objective: The purpose of this project is to examine students' physical activity and how it is associated with personal, behavioral, and environmental factors., Methods: Student Activity and Sport Study Ireland (SASSI) is a university-based cross-sectional study that was carried out across the island of Ireland in 2014. A novel and comprehensive Web-based environmental audit tool (EAT) gathered information pertaining to the environment provided by universities for physical activity. A Web-based student survey (SS) collected information about physical activity beliefs, attitudes, motivations, and behaviors of students. The audit tool and SS were developed through rigorous consultation processes involving international experts. An institutional champion volunteered at each university to recruit, administer, and ensure the completion of both assessments., Results: Data collection was undertaken between May and December 2014. A total of 80% (33/41) of universities completed the EAT, whereas 88.31% (8122/9197) of students (49.10% [3966/8122] male; mean 23.17 [SD 6.75], years) completed the SS sufficiently. Studies are currently underway with the data collected using this protocol., Conclusions: SASSI provides a novel and comprehensive protocol for systematically assessing the PA of students and the related personal, behavioral, and actual environmental factors. The strengths of the SASSI study are presented and include high response rates and a unique dataset that can provide information to relevant stakeholders and policy makers, along with aiding the development of university environments and interventions that promote PA involvement. The weaknesses of the protocol are recognized with suggestions given to overcome them in future research. This protocol is applicable for other countries and has great potential to create harmonization of data, which would allow for direct comparisons across nations., International Registered Report Identifier (irrid): RR1-10.2196/10823., (©Joseph J Murphy, Catherine B Woods, Marie H Murphy, Niamh Murphy, Neal Byrne, Ciaran Mac Donncha. Originally published in JMIR Research Protocols (http://www.researchprotocols.org), 21.02.2019.)
- Published
- 2019
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31. Identification of health-related behavioural clusters and their association with demographic characteristics in Irish university students.
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Murphy JJ, MacDonncha C, Murphy MH, Murphy N, Timperio A, Leech RM, and Woods CB
- Subjects
- Adolescent, Adult, Alcohol Drinking epidemiology, Cluster Analysis, Female, Humans, Ireland epidemiology, Male, Risk Factors, Smoking epidemiology, Students statistics & numerical data, Substance-Related Disorders epidemiology, Surveys and Questionnaires, Universities, Young Adult, Alcohol Drinking psychology, Exercise psychology, Feeding Behavior psychology, Health Behavior, Smoking psychology, Students psychology, Substance-Related Disorders psychology
- Abstract
Background: Students engage in risky health-related behaviours that influence their current and future health status. Health-related behaviours cluster among adults and differently based on sub-populations characteristics but research is lacking for university populations. Examining the clustering of health- related behaviours can inform our initiatives and strategies, while examining cluster members' characteristics can help target those who can prosper most from health promotion efforts. This study examines the clustering of health-related behaviours in Irish university students, and investigates the relationship with students' sex, age, field of study and accommodation type., Methods: An online survey was completed by 5672 Irish university students (51.3% male; 21.60 ± 5.65 years) during 2014. Two-step cluster analysis was used to understand how health-related behaviours (physical activity, smoking, alcohol intake, drug use and dietary habits) cluster among male and female students. Binary logistic regressions were conducted to examine the likelihood of students falling into certain clusters based on their characteristics., Results: Five cluster groups were identified in males and four in females. A quarter of males were categorised as ideal healthy with older students and those from certain fields of study having a higher likelihood of being classified in a low physical activity and poor diet (OR = 1.06-2.89), alcohol consumption (OR = 1.03-3.04), or smoking and drug use (OR = 1.06-2.73) cluster. Forty-five percent of females were categorised as ideal healthy with older females more likely to be in a low active and smoking cluster (OR = 1.03), and less likely to be in a convenience food cluster (OR = 0.96). Females from certain fields of study were also more likely to be classified in these clusters (OR = 1.59-1.76). Students living away from their family home had in increased likelihood of being in a cluster related to a higher frequency of alcohol consumption (OR = 1.72-3.05)., Conclusion: Health-related behaviours cluster among this population and need to be taken into account when designing multi-health interventions and policies. These findings can be used to target student groups at risk, leading to more efficient and successful health promotion efforts. The addition of modules providing information regarding health-related behaviours are advised in all fields of study.
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- 2019
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32. Determination of the Frequency of Right and Left Internal Mammary Artery Embolization in Single Ventricle Patients: A Two-Center Study.
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Mohammad Nijres B, Taqatqa AS, Mubayed L, Jutzy GJ, Abdulla RI, Diab KA, Nguyen HH, Muller BA, Sosnowski CR, Murphy JJ, Vettukattil J, Kaley VR, Marckini DN, Samuel BP, Abdelhady K, and Awad S
- Subjects
- Cardiac Catheterization adverse effects, Cardiac Catheterization statistics & numerical data, Child, Preschool, Coronary Artery Disease complications, Coronary Artery Disease surgery, Embolization, Therapeutic adverse effects, Female, Fontan Procedure adverse effects, Fontan Procedure statistics & numerical data, Heart Defects, Congenital complications, Heart Ventricles abnormalities, Humans, Infant, Male, Retrospective Studies, Treatment Outcome, Embolization, Therapeutic statistics & numerical data, Heart Defects, Congenital therapy, Mammary Arteries
- Abstract
Embolization of systemic to pulmonary artery collaterals to regulate pulmonary arterial flow or pressure of the cavopulmonary circulation in patients with single ventricle is a common practice. The relative incidence and impact of this practice on future interventions like coronary artery bypass grafting is poorly understood. This study aims to evaluate the frequency and implications of internal mammary artery (IMA) embolization in the single ventricle (SV) population. A retrospective chart review was performed of SV patients who underwent cardiac catheterization before and after Fontan procedure between February 2007 and 2017. Data were collected from two tertiary care centers in the Midwest. Of the 304 SV patients, 62 (20.4%) underwent embolization of one or more IMAs, whereas 242 (79.6%) did not. The rate of embolization of IMA was 40.5% in one center and 14.5% in the second center. Among patients who received IMA embolization, left internal mammary artery (LIMA) embolization was seen in 6 (9.7%) patients. Majority of patients underwent either right internal mammary artery (RIMA) embolization (n = 25; 40.3%) or RIMA and LIMA embolization (n = 27; 43.5%). IMA embolization in SV patients is common. Embolizing IMAs early in life will likely eliminate a valuable graft option for coronary artery bypass grafting should it be required in the future care of these patients. Multi-center, prospective, nation-wide studies are warranted to examine coronary artery disease in the SV population and true frequency of IMA embolization. Delineation of which IMAs were embolized is a necessary in surgical and cardiac intervention national data, such as Society of Thoracic Surgeons (STS) database. All measures should be taken to preserve IMAs patency, if deemed feasible and safe.
- Published
- 2018
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33. Use of Speckle Tracking Echocardiography to Assess Left Ventricular Systolic Function in Patients with Surgically Repaired Tetralogy of Fallot: Global and Segmental Assessment.
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Mohammad Nijres B, Bokowski J, Al-Kubaisi M, Abdulla RI, Murphy JJ, Awad S, and Diab KA
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- Adolescent, Cardiac Surgical Procedures adverse effects, Child, Cross-Sectional Studies, Female, Heart Ventricles diagnostic imaging, Heart Ventricles physiopathology, Humans, Male, Retrospective Studies, Tetralogy of Fallot diagnostic imaging, Ventricular Dysfunction, Left physiopathology, Echocardiography methods, Tetralogy of Fallot surgery, Ventricular Dysfunction, Left diagnostic imaging, Ventricular Function, Left physiology
- Abstract
Patients with repaired Tetralogy of Fallot (rToF) can have significant right and left ventricular dysfunction which can impact clinical outcome. Conventional echocardiographic evaluation using ejection fraction can be limited in detecting early stages of deteriorating left ventricular (LV) systolic function. Speckle-tracking echocardiography (STE) provides a promising emerging tool for early detection of LV systolic dysfunction. The aim of this cross-sectional study is to evaluate the left ventricular global and regional function using STE in rToF patients with preserved left ventricular ejection fraction to detect early signs of LV dysfunction. The study is a retrospective review of the medical records and transthoracic echocardiograms of rTOF patients who were seen in the pediatric cardiology clinic at our institution from August 2016 till May 2018. The rTOF group was compared with a matched healthy control group. Offline strain analysis of TTE studies was completed in each subject according to mode set by the American Society of Echocardiography. Twenty-two patients with rTOF and 22 age-matched controls (rTOF 18.7 ± 6 years and control 14.6 ± 9.6 years, P value 0.19) were included during the study period. The rTOF group consisted of 12 males and 10 females, whereas the control group consisted of 15 males and 7 females. There was no significant difference in terms of LV ejection fraction using both 2-chamber as well as 4-chamber views. Global LV longitudinal strain was significantly lower in the rTOF group compared with the control group (rTOF - 15.92 ± 3.16 vs control - 22.79 ± 2.45, P value 0.00). All 17 segments showed significantly lower longitudinal strains in rTOF group compared with the control group. Global circumferential left ventricle strain was significantly lower in the rTOF patients compared with the control group (- 17.24 ± 5.86 vs - 22.74 ± 3.99, P value 0.001). 13 out of 16 segments had lower circumferential strains in the rTOF patients compared with controls. Asymptomatic surgically repaired TOF patients exhibited abnormal segmental and global left ventricle longitudinal and circumferential strains despite having normal left ventricle ejection fraction. Our findings suggest subclinical damage to the left ventricle systolic function post-surgical repair of TOF. 2-D speckle-tracking echocardiography may be used as a valuable method in the early recognition of left myocardial systolic function impairment in patients after TOF repair. The application of this method to guide clinical decision and management of rTOF patients such as earlier pulmonary valve replacement or risk stratification for sudden cardiac death needs further investigation.
- Published
- 2018
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34. Variable cardiovascular phenotypes associated with SMAD2 pathogenic variants.
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Granadillo JL, Chung WK, Hecht L, Corsten-Janssen N, Wegner D, Nij Bijvank SWA, Toler TL, Pineda-Alvarez DE, Douglas G, Murphy JJ, Shimony J, and Shinawi M
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- Adult, Child, Child, Preschool, Female, Humans, Middle Aged, Pregnancy, Exome, Exome Sequencing methods, Genetic Predisposition to Disease, Genotype, Phenotype, Aortic Aneurysm genetics, Heart Defects, Congenital genetics, Mutation, Smad2 Protein genetics
- Abstract
SMAD2 is a downstream effector in the TGF-β signaling pathway, which is important for pattern formation and tissue differentiation. Pathogenic variants in SMAD2 have been reported in association with arterial aneurysms and dissections and in large cohorts of subjects with complex congenital heart disease (CHD). We used whole exome sequencing (WES) to investigate the molecular cause of CHD and other congenital anomalies in three probands and of an arterial aneurysm in an additional patient. Patients 1 and 2 presented with complex CHD, developmental delay, seizures, dysmorphic features, short stature, and poor weight gain. Patient 3 was a fetus with complex CHD and heterotaxy. The fourth patient is an adult female with aortic root aneurysm and physical features suggestive of a connective tissue disorder. WES identified pathogenic truncating variants, a splice variant, and a predicted deleterious missense variant in SMAD2. We compare the phenotypes and genotypes in our patients with previously reported cases. Our data suggest two distinct phenotypes associated with pathogenic variants in SMAD2: complex CHD with or without laterality defects and other congenital anomalies, and a late-onset vascular phenotype characterized by arterial aneurysms with connective tissue abnormalities., (© 2018 Wiley Periodicals, Inc.)
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- 2018
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35. Total Synthesis of Putative Chagosensine.
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Heinrich M, Murphy JJ, Ilg MK, Letort A, Flasz J, Philipps P, and Fürstner A
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- Catalysis, Cobalt chemistry, Cyclization, Hydroxylation, Macrolides chemistry, Oxidation-Reduction, Macrolides chemical synthesis
- Abstract
The marine macrolide chagosensine is the only natural product known to date that embodies a Z,Z-configured chloro-1,3-diene unit. This distinguishing substructure was prepared by a sequence of palladium-catalyzed 1,2-distannation of an alkyne precursor, regioselective Stille cross-coupling at the terminus of the resulting bisstannyl alkene with an elaborated alkenyl iodide, followed by chloro-destannation of the remaining internal site. The preparation of the required substrates centered on cobalt-catalyzed oxidative cyclization reactions of hydroxylated olefin precursors, which allowed the 2,5-trans-disubstituted tetrahydrofuran rings, embedded into each building block, to be formed with excellent selectivity. The highly strained macrolactone could ultimately be closed under forcing Yamaguchi conditions. Comparison of the spectral data of the synthetic sample with those of authentic chagosensine methyl ester confirmed that the structure of this intriguing compound has been mis-assigned by the isolation team., (© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2018
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36. Bile Duct Injury in Children: Is There a Role for Early Endoscopic Retrograde Cholangiopancreatography?
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Aljahdali AH and Murphy JJ
- Abstract
Introduction Liver injury is common among pediatric abdominal trauma. Nonoperative management is the standard of care in isolated stable liver injuries. Bile leak is not an uncommon complication in moderate- and high-grade injuries. Case series Three pediatric patients (age: 10-15 years) suffered grade IV liver injuries secondary to blunt abdominal trauma. All developed significant bile leak treated nonoperatively with endoscopic retrograde cholangiopancreatography (ERCP), and patients 1 and 2 were treated with bile duct stent alone. Patient 3 required laparotomy for bile peritonitis and abdominal compartment syndrome followed by interval ERCP and bile duct stent. Conclusion Traumatic bile leaks if not recognized and managed early can result in significant morbidity. This paper describes the presentation and treatment of three pediatric patients with blunt liver trauma complicated by significant bile leaks that were managed successfully with ERCP and bile duct stent. This paper demonstrates the importance of early detection of bile leak to prevent bile peritonitis. Abdominal imaging 4 to 5 days postinjury can help in detecting bile accumulation. We believe that ERCP and bile duct stent are becoming the standard of care in diagnosing and treating traumatic bile leak. This paper confirms the safety and feasibility of this technique in the pediatric population.
- Published
- 2018
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37. Patent Foramen Ovale Closure for Stroke Prevention and Other Disorders.
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Collado FMS, Poulin MF, Murphy JJ, Jneid H, and Kavinsky CJ
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- Animals, Embolism, Paradoxical diagnostic imaging, Embolism, Paradoxical etiology, Embolism, Paradoxical mortality, Foramen Ovale, Patent complications, Foramen Ovale, Patent diagnostic imaging, Foramen Ovale, Patent mortality, Humans, Prosthesis Design, Risk Factors, Septal Occluder Device, Stroke diagnostic imaging, Stroke etiology, Stroke mortality, Treatment Outcome, Cardiac Catheterization adverse effects, Cardiac Catheterization instrumentation, Cardiac Catheterization mortality, Cardiac Surgical Procedures adverse effects, Cardiac Surgical Procedures mortality, Embolism, Paradoxical prevention & control, Foramen Ovale, Patent therapy, Stroke prevention & control
- Published
- 2018
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38. Routine Cardiac Catheterization Prior to Fontan Operation: Is It a Necessity?
- Author
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Mohammad Nijres B, Murphy JJ, Diab K, Awad S, and Abdulla RI
- Subjects
- Child, Preschool, Female, Fontan Procedure methods, Heart Defects, Congenital surgery, Heart Ventricles surgery, Hemodynamics physiology, Humans, Infant, Male, Retrospective Studies, Cardiac Catheterization methods, Echocardiography methods, Heart Defects, Congenital diagnosis, Preoperative Care methods
- Abstract
Prior to the Fontan procedure, patients with single ventricle physiology with Glenn shunt are typically referred for cardiac catheterization to assess hemodynamics and potentially provide interventional measures. Currently, echocardiography provides detailed information which together with other non-invasive imaging such as CT scan and MRI may obviate the need for routine cardiac catheterization prior to the Fontan procedure. In this study, we examine the findings in cardiac catheterization in this population to determine: (a) the accuracy of echocardiography in providing adequate information prior to the Fontan procedure, particularly in identifying those in need of per-catheter intervention, and (b) the percentage of patients requiring interventional procedures during cardiac catheterization. We performed a retrospective chart review of echocardiographic and cardiac catheterization data for patients who underwent pre-Fontan cardiac catheterization at our center in the period from 02/01/2008 to 02/28/2017. We aimed to re-examine the necessity of routine cardiac catheterization in all single ventricle patients. This was performed through examining pre-catheterization echocardiography reports and comparing them to findings of the subsequent cardiac catheterization reports. Echocardiography reports were evaluated for accuracy in identifying significant anatomical or hemodynamic findings, which may impact success of Fontan procedure as well as the ability of echocardiography to predict findings important to know prior to the Fontan procedure. In this cohort of 40 children, 3 patients were found to have significant hemodynamic findings through cardiac catheterization which were not previously known by echocardiography. In addition, 28 out of 40 patients (70%) required interventional procedures to address significant abnormalities (systemic to pulmonary arterial collaterals, pulmonary artery stenosis, aortic arch stenosis, etc.). All cases of aortic arch stenosis were detected by echocardiography, however, all patients who required systemic to pulmonary arterial or left SVC embolization were not detected by echocardiography. Furthermore, echocardiography did not detect the need for branch pulmonary artery stenosis in 50% of cases. Cardiac catheterization appears to be an essential part of patient assessment prior to Fontan completion in patients with single ventricle physiology. This current practice may change in the future if a non-invasive screening tool is found to have high positive and negative predictive values in identifying the subset of patients who require potential intervention in pre-Fontan cardiac catheterization.
- Published
- 2018
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39. 617 WHAT IS THE NATURAL HISTORY OF HEART FAILURE DUE TO LEFT VENTRICULAR SYSTOLIC DYSFUNCTION IN THE ERA OF EVIDENCE BASED MEDICINE?
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Singh, R., primary, Murphy, JJ., additional, Fuat, A., additional, Brennan, G., additional, Wilson, DW, additional, and Hungin, APS., additional
- Published
- 2012
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40. The effects of dairy cow weight on selected soil physical properties related to compaction
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Herbin, T, primary, Hennessy, D, additional, Murphy, JJ, additional, Richards, K, additional, Piwowarczyk, A, additional, and Holden, NM, additional
- Published
- 2010
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41. Peripartum health and welfare of Holstein-Friesian cows in a confinement-TMR system compared to a pasture-based system
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Olmos, G, primary, Mee, JF, additional, Hanlon, A, additional, Patton, J, additional, Murphy, JJ, additional, and Boyle, L, additional
- Published
- 2009
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42. Acute and midterm results following perventricular device closure of muscular ventricular septal defects: A multicenter PICES investigation.
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Gray RG, Menon SC, Johnson JT, Armstrong AK, Bingler MA, Breinholt JP, Kenny D, Lozier J, Murphy JJ, Sathanandam SK, Taggart NW, Trucco SM, Goldstein BH, and Gordon BM
- Subjects
- Child, Child, Preschool, Echocardiography, Transesophageal, Female, Heart Septal Defects, Ventricular diagnostic imaging, Humans, Infant, Length of Stay, Male, Percutaneous Coronary Intervention adverse effects, Prosthesis Design, Retrospective Studies, Risk Factors, Time Factors, Treatment Outcome, United States, Cardiac Surgical Procedures adverse effects, Heart Septal Defects, Ventricular therapy, Percutaneous Coronary Intervention instrumentation, Septal Occluder Device
- Abstract
Objectives: To describe acute and mid-term results of hybrid perventricular device closure of muscular ventricular septal defects (mVSDs)., Background: Perventricular device closure of mVSDs can mitigate technical limitations of percutaneous closure and need for cardiopulmonary bypass or ventriculotomy with a surgical approach., Methods: This is a multicenter retrospective cohort study of patients undergoing hybrid perventricular mVSD device closure from 1/2004 to 1/2014. Procedural details, adverse events, outcomes, and follow-up data were collected. Patients were divided into two groups: (1) simple (mVSD closure alone) and (2) complex (mVSD closure with concomitant cardiac surgery)., Results: Forty-seven patients (60% female) underwent perventricular mVSD device closure at a median age of 5.2 months (IQR 1.8-8.9) and weight of 5.1 kg (IQR 4.0-6.9). Procedural success was 91% [100% (n = 22) simple and 84% (n = 21/25) complex]. Adverse events occurred in 19% (9/47) [9% (2/22) simple and 28% (7/25) complex]. Hospital length of stay (LOS) was shorter in the simple vs. complex group (4 vs. 14 days, P < 0.01). At mid-term follow-up of 19.2 months (IQR 2.3-43) 90% of pts had complete mVSD closure; none developed late heart block, increased atrioventricular (AV) valve insufficiency or ventricular dysfunction., Conclusions: Perventricular device closure of simple mVSD was associated with a high rate of procedural success, few adverse events, and short hospital LOS. Procedural adverse events were associated with the presence of concomitant complex surgery. Residual mVSD, AV valve insufficiency, or ventricular dysfunction were uncommon at mid-term follow-up. © 2017 Wiley Periodicals, Inc., (© 2017 Wiley Periodicals, Inc.)
- Published
- 2017
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43. Studies on the Enantioselective Iminium Ion Trapping of Radicals Triggered by an Electron-Relay Mechanism.
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Bahamonde A, Murphy JJ, Savarese M, Brémond É, Cavalli A, and Melchiorre P
- Abstract
A combination of electrochemical, spectroscopic, computational, and kinetic studies has been used to elucidate the key mechanistic aspects of the previously reported enantioselective iminium ion trapping of photochemically generated carbon-centered radicals. The process, which provides a direct way to forge quaternary stereocenters with high fidelity, relies on the interplay of two distinct catalytic cycles: the aminocatalytic electron-relay system, which triggers the stereoselective radical trap upon iminium ion formation, and the photoredox cycle, which generates radicals under mild conditions. Critical to reaction development was the use of a chiral amine catalyst, bearing a redox-active carbazole unit, which could rapidly reduce the highly reactive and unstable intermediate generated upon radical interception. The carbazole unit, however, is also involved in another step of the electron-relay mechanism: the transiently generated carbazole radical cation acts as an oxidant to return the photocatalyst into the original state. By means of kinetic and spectroscopic studies, we have identified the last redox event as being the turnover-limiting step of the overall process. This mechanistic framework is corroborated by the linear correlation between the reaction rate and the reduction potential of the carbazole unit tethered to the aminocatalyst. The redox properties of the carbazole unit can thus be rationally tuned to improve catalytic activity. This knowledge may open a path for the mechanistically driven design of the next generation of electron-relay catalysts.
- Published
- 2017
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44. Reliable exclusion of prognostically significant coronary disease in left ventricular dysfunction by cardiac MRI.
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Thompson AC, Crilley JG, Wilson DW, Hungin AP, Fuat A, and Murphy JJ
- Subjects
- Aged, Causality, Diagnosis, Differential, False Positive Reactions, Female, Humans, Male, Middle Aged, Prognosis, Reproducibility of Results, Sensitivity and Specificity, Coronary Artery Disease complications, Coronary Artery Disease diagnostic imaging, Magnetic Resonance Angiography methods, Magnetic Resonance Imaging, Cine methods, Ventricular Dysfunction, Left diagnostic imaging, Ventricular Dysfunction, Left etiology
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Aim: To assess the ability of cardiac magnetic resonance (CMR) to exclude prognostically significant coronary artery disease (CAD) in patients with left ventricular systolic dysfunction (LVSD)., Materials and Methods: A cohort of patients who underwent both X-ray angiography and CMR since 2006 was reviewed retrospectively. Records of those with European criteria for LVSD (left ventricular ejection fraction [LVEF] <50% or LV end-diastolic volume index [LVEDVI] ≥97 ml/m
2 ) on CMR or transthoracic echo were analysed. The presence and extent of subendocardial late gadolinium enhancement (LGE) was recorded with the 17-segment model. The degree of coronary stenosis at X-ray angiography was assessed visually and significant disease defined as stenosis of the LMS ≥50%, or proximal left anterior descending ≥75%, or ≥70% in two main coronary vessels., Results: One hundred and sixteen patients were included. The mean age was 64 years and 78% were male. The mean LVEF was 40%. The prevalence of prognostic CAD was 47%. The presence of subendocardial LGE detected prognostically significant CAD with a sensitivity of 100% (95% CI: 94-100%) with no false-negative results., Conclusions: The absence of subendocardial LGE on CMR reliably excludes prognostic CAD in patients with LVSD., (Copyright © 2016 The Royal College of Radiologists. Published by Elsevier Ltd. All rights reserved.)- Published
- 2017
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45. Development of dairy-based functional foods
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Stanton, C, primary, Coakley, M, additional, Murphy, JJ, additional, Fitzgerald, GF, additional, Devery, R, additional, and Ross, RP, additional
- Published
- 2002
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46. FOLLOW‐UP OF PATIENTS WITH SUSPECTED VENOUS THROMBOSIS BUT NEGATIVE RADIONUCLIDE VENOGRAPHY
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Murphy, JJ, primary and Chandler, ST, additional
- Published
- 1995
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47. TRAINING AND SUPERVISION OF TEMPORARY TRANSVENOUS PACEMAKER INSERTION
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Murphy, JJ, primary, Frain, JPJ, additional, and Stephenson, CJ, additional
- Published
- 1995
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48. Radiation Exposure by Three-Dimensional Rotational Angiography (3DRA) During Trans-catheter Melody Pulmonary Valve Procedures (TMPV) in a Pediatric Cardiac Catheterization Laboratory.
- Author
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Nguyen HH, Balzer DT, Murphy JJ, Nicolas R, and Shahanavaz S
- Subjects
- Angiography, Child, Fluoroscopy, Humans, Imaging, Three-Dimensional, Pulmonary Valve, Radiation Dosage, Radiation Exposure, Retrospective Studies, Cardiac Catheterization
- Abstract
This retrospective study aims to evaluate radiation exposure by three-dimensional rotational angiography (3DRA) during trans-catheter Melody pulmonary valve (TMPV) procedures. 3DRA has been reported to have added value in the management of complex congenital heart disease aiding in the performance of interventional procedures albeit with concerns of higher radiation exposure. We test the hypothesis that 3DRA does not cause additional radiation exposure during TMPV procedures. We analyzed all 81 TMPV procedures performed at St. Louis Children's Hospital, MO, USA, from January 1, 2011 to December 31, 2014. Dose-area product (DAP), DAP indexed to body weight (DAP/BW), fluoroscopy time (FT), and weight-fluoroscopy time product of each procedure were recorded. We reviewed each procedure's images to determine whether additional interventions were performed (e.g., pulmonary artery angioplasty or treatment of conduit pseudo-aneurysm). 3DRA was used in 36 % of the procedures. 3DRA group had a higher number of additional procedures performed. The 3DRA group did not differ from the non-3DRA group in DAP, DAP/BW, and weight-fluoroscopy time product. 3DRA does not cause greater radiation exposure during TMPV procedures.
- Published
- 2016
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49. A dismantling study of the Partners for Change Outcome Management System.
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Mikeal CW, Gillaspy JA, Scoles MT, and Murphy JJ
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- Female, Humans, Male, Outcome Assessment, Health Care, Counseling, Psychotherapy methods
- Abstract
The current study used a dismantling design to investigate the relative efficacy of components of the Partners for Change Outcome Management System (PCOMS; Duncan, 2012). Clients (n = 94) from a university counseling center were randomly assigned to 1 of 3 conditions: PCOMS Full, Outcome Rating Scale (ORS)-only, or Session Rating Scale (SRS)-only and nested within therapists (n = 12). Results from hierarchical linear modeling and a 2-way analysis of variance indicated no statistically significant differences in outcome or rate of change on the Behavior Symptom Checklist-18 (BSI-18; Derogatis, 2001) across all 3 conditions. These findings suggest that using either the ORS or SRS component of the PCOMS may yield equivalent outcomes to that of the full PCOMS. Additional dismantling studies with various populations and settings are needed to further clarify the relative influence of the ORS, SRS, and full PCOMS on client outcomes. (PsycINFO Database Record, ((c) 2016 APA, all rights reserved).)
- Published
- 2016
- Full Text
- View/download PDF
50. Indirect Reciprocity, Resource Sharing, and Environmental Risk: Evidence from Field Experiments in Siberia.
- Author
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Howe EL, Murphy JJ, Gerkey D, and West CT
- Subjects
- Adult, Female, Humans, Male, Risk Factors, Siberia, Cooperative Behavior, Environment
- Abstract
Integrating information from existing research, qualitative ethnographic interviews, and participant observation, we designed a field experiment that introduces idiosyncratic environmental risk and a voluntary sharing decision into a standard public goods game. Conducted with subsistence resource users in rural villages on the Kamchatka Peninsula in Northeast Siberia, we find evidence consistent with a model of indirect reciprocity and local social norms of helping the needy. When participants are allowed to develop reputations in the experiments, as is the case in most small-scale societies, we find that sharing is increasingly directed toward individuals experiencing hardship, good reputations increase aid, and the pooling of resources through voluntary sharing becomes more effective. We also find high levels of voluntary sharing without a strong commitment device; however, this form of cooperation does not increase contributions to the public good. Our results are consistent with previous experiments and theoretical models, suggesting strategic risks tied to rewards, punishments, and reputations are important. However, unlike studies that focus solely on strategic risks, we find the effects of rewards, punishments, and reputations are altered by the presence of environmental factors. Unexpected changes in resource abundance increase interdependence and may alter the costs and benefits of cooperation, relative to defection. We suggest environmental factors that increase interdependence are critically important to consider when developing and testing theories of cooperation.
- Published
- 2016
- Full Text
- View/download PDF
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