75 results on '"Journo S"'
Search Results
2. Genomic alterations drive metastases formation in pancreatic ductal adenocarcinoma cancer: deciphering the role of CDKN2A and CDKN2B in mediating liver tropism.
- Author
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Journo S, Goldberg AK, Sokol ES, Zinger L, Pasmanik-Chor M, Sarvin B, Simkin D, Fuchs S, Shlomi T, Wolf I, and Rubinek T
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- Ammonia therapeutic use, Cyclin-Dependent Kinase Inhibitor p15, Cyclin-Dependent Kinase Inhibitor p16 genetics, Humans, Tropism, Pancreatic Neoplasms, Adenocarcinoma, Carcinoma, Pancreatic Ductal pathology, Liver Neoplasms metabolism, Pancreatic Neoplasms metabolism
- Abstract
Metastases are often the direct cause of death from pancreatic ductal adenocarcinoma (PDAC). The role of genomic alterations (GA) in mediating tropism and metastasis formation by PDAC cells is currently unknown. We aimed to identify GAs predisposing colonization of PDAC cells to the liver and decipher mechanisms enabling this process. In order to reveal specific genes, we studied the frequency of GA in 8,880 local and 7,983 metastatic PDAC samples. We observed differential pattern of GA in the local tumor and specific metastatic sites, with liver metastases characterized by deletion of CDKN2A/B (encoding p16/p15, respectively). The role of CDKN2A/B in promoting liver metastasis was evidenced by enhanced tumorigenic phenotype of p15/p16-deleted PDAC cells when exposed to hepatocytes conditioned media. The liver is characterized by high-ammonia low-glutamine environment and transcriptomic assays indicated unique adaptation of PDAC cells to these conditions, including regulation of genes leading to reduced glutaminolysis, like overexpression of GLUL and reduction in GLS2. Furthermore, metabolic assays indicated an increase in glutamate derived from [U-
13 C]-glucose in p15/p16-deleted cells. Importantly, these cells thrived under high ammonia condition. These data suggest a unique role for genomic alterations in mediating tropism of PDAC. Among these alterations, p15/16 deletion was identified as a promoter of liver metastases. Further studies indicated a unique role for p15/16 in regulating glutaminolysis. These findings reveal vulnerabilities in PDAC cells, which may pave the way for the development of novel therapeutic strategies aiming at the prevention of liver metastases formation., (© 2022. The Author(s), under exclusive licence to Springer Nature Limited.)- Published
- 2022
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3. R269C variant of ESR1: high prevalence and differential function in a subset of pancreatic cancers.
- Author
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Boldes T, Merenbakh-Lamin K, Journo S, Shachar E, Lipson D, Yeheskel A, Pasmanik-Chor M, Rubinek T, and Wolf I
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- Breast Neoplasms pathology, Cell Line, Tumor, Cell Movement genetics, Cell Proliferation genetics, Estrogen Receptor alpha metabolism, Female, Humans, Pancreatic Neoplasms pathology, Polymorphism, Single Nucleotide, Protein Domains genetics, RNA-Seq, Response Elements genetics, Risk Factors, Transcription, Genetic, Breast Neoplasms genetics, Estrogen Receptor alpha genetics, Gene Expression Regulation, Neoplastic, Pancreatic Neoplasms genetics
- Abstract
Background: Estrogen receptor α (ESR1) plays a critical role in promoting growth of various cancers. Yet, its role in the development of pancreatic cancer is not well-defined. A less studied region of ESR1 is the hinge region, connecting the ligand binding and DNA domains. rs142712646 is a rare SNP in ESR1, which leads to a substitution of arginine to cysteine at amino acid 269 (R269C). The mutation is positioned in the hinge region of ESR1, hence may affect the receptor structure and function. We aimed to characterize the activity of R269C-ESR1 and study its role in the development of pancreatic cancer., Methods: Transcriptional activity was evaluated by E2-response element (ERE) and AP1 -luciferase reporter assays and qRT-PCR. Proliferation and migration were assessed using MTT and wound healing assays. Gene-expression analysis was performed using RNAseq., Results: We examined the presence of this SNP in various malignancies, using the entire database of FoundationOne and noted enrichment of it in a subset of pancreatic non-ductal adenocarcinoma (n = 2800) compared to pancreatic ductal adenocarcinoma (PDAC) as well as other tumor types (0.53% vs 0.29%, p = 0.02). Studies in breast and pancreatic cancer cells indicated cell type-dependent activity of ESR1 harboring R269C. Thus, expression of R269C-ESR1 enhanced proliferation and migration of PANC-1 and COLO-357 pancreatic cancer cells but not of MCF-7 breast cancer cells. Moreover, R269C-ESR1 enhanced E2-response elements (ERE) and AP1-dependent transcriptional activity and increased mRNA levels of ERE and AP1-regulated genes in pancreatic cancer cell lines, but had a modest effect on MCF-7 breast cancer cells. Accordingly, whole transcriptome analysis indicated alterations of genes associated with tumorigenicity in pancreatic cancer cells and upregulation of genes associated with cell metabolism and hormone biosynthesis in breast cancer cells., Conclusions: Our study shed new light on the role of the hinge region in regulating transcriptional activity of the ER and indicates cell-type specific activity, namely increased activity in pancreatic cancer cells but reduced activity in breast cancer cells. While rare, the presence of rs142712646 may serve as a novel genetic risk factor, and a possible target for therapy in a subset of non-ductal pancreatic cancers.
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- 2020
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4. THU0016 Heparanase Is Active in Human Osteoarthritic Cartilage and Drives Catabolic Responses in Primary Human Chondrocytes
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Gibor, G., primary, Ilan, N., additional, Journo, S., additional, Sharabi, A., additional, Elkayam, O., additional, Vlodavsky, I., additional, and Arad, U., additional
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- 2016
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5. The role of heparanase in the metabolic responses of human articular chondrocytes
- Author
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Gibor, G., primary, Ilan, N., additional, Journo, S., additional, Elkayam, O., additional, Vlodavsky, I., additional, and Arad, U., additional
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- 2016
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6. SAT0037 An ENPP1-Specific Inhibitor Attenuates Extracellular Ecto-Pyrophosphatase Activity in Human Osteoarthritic Cartilage
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Arad, U., primary, Svetitsky, S., additional, Journo, S., additional, Danino, O., additional, and Fischer, B., additional
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- 2015
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7. Correction to: Identification of adenine-N9-(methoxy)ethyl-β-bisphosphonate as NPP1 inhibitor attenuates NPPase activity in human osteoarthritic chondrocytes.
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Nassir M, Arad U, Lee SY, Journo S, Renn SMC, Zimmermann H, Pelletier J, Sévigny J, Müller CE, and Fischer B
- Abstract
The original version of the article unfortunately contained an error.
- Published
- 2019
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8. Identification of adenine-N9-(methoxy)ethyl-β-bisphosphonate as NPP1 inhibitor attenuates NPPase activity in human osteoarthritic chondrocytes.
- Author
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Nassir M, Arad U, Lee SY, Journo S, Mirza S, Renn C, Zimmermann H, Pelletier J, Sévigny J, Müller CE, and Fischer B
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- Chondrocalcinosis, Chondrocytes drug effects, Humans, Osteoarthritis, Phosphoric Diester Hydrolases, Adenosine Diphosphate analogs & derivatives, Adenosine Triphosphate analogs & derivatives, Enzyme Inhibitors pharmacology, Pyrophosphatases antagonists & inhibitors
- Abstract
Overproduction of extracellular diphosphate due to hydrolysis of ATP by NPP1 leads to pathological calcium diphosphate (pyrophosphate) dihydrate deposition (CPPD) in cartilage, resulting in a degenerative joint disease that today lacks a cure. Here, we targeted the identification of novel NPP1 inhibitors as potential therapeutic agents for CPPD deposition disease. Specifically, we synthesized novel analogs of AMP (NPP1 reaction product) and ADP (NPP1 inhibitor). These derivatives incorporate several chemical modifications of the natural nucleotides including (1) a methylene group replacing the P
α,β -bridging oxygen atom to provide metabolic resistance, (2) sulfonate group(s) replacing phosphonate(s) to improve binding to NPP1's catalytic zinc ions, (3) an acyclic nucleotide analog to allow flexible binding in the NPP1 catalytic site, and (4) a benzimidazole base replacing adenine. Among the investigated compounds, adenine-N9-(methoxy)ethyl-β-bisphosphonate, 10, was identified as an NPP1 inhibitor (Ki 16.3 μM vs. the artificial substrate p-nitrophenyl thymidine-5'-monophosphate (p-Nph-5'-TMP), and 9.60 μM vs. the natural substrate, ATP). Compound 10 was selective for NPP1 vs. human NPP3, human CD39, and tissue non-specific alkaline phosphatase (TNAP), but also inhibited human CD73 (Ki 12.6 μM). Thus, 10 is a dual NPP1/CD73 inhibitor, which could not only be of interest for treating CPPD deposition disease and calcific aortic valve disease but may also be considered for the immunotherapy of cancer. Compound 10 proved to be a promising inhibitor, which almost completely reduces NPPase activity in human osteoarthritic chondrocytes at a concentration of 100 μM.- Published
- 2019
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9. Ligand-binding Domain-activating Mutations of ESR1 Rewire Cellular Metabolism of Breast Cancer Cells.
- Author
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Zinger L, Merenbakh-Lamin K, Klein A, Elazar A, Journo S, Boldes T, Pasmanik-Chor M, Spitzer A, Rubinek T, and Wolf I
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- Animals, Apoptosis, Biomarkers, Tumor genetics, Breast Neoplasms genetics, Breast Neoplasms pathology, Cell Movement, Cell Proliferation, Estrogens metabolism, Female, Follow-Up Studies, Gene Expression Regulation, Neoplastic, Glucose metabolism, Glutamine metabolism, Humans, Ligands, Mice, Mice, Inbred BALB C, Mice, Nude, Prognosis, Protein Binding, Protein Domains, Tumor Cells, Cultured, Xenograft Model Antitumor Assays, Biomarkers, Tumor metabolism, Breast Neoplasms metabolism, Estrogen Receptor alpha genetics, Gain of Function Mutation, Metabolome
- Abstract
Purpose: Mutations in the ligand-binding domain (LBD) of estrogen receptor α (ER) confer constitutive transcriptional activity and resistance to endocrine therapies in patients with breast cancer. Accumulating clinical data suggest adverse outcome for patients harboring tumors expressing these mutations. We aimed to elucidate mechanisms conferring this aggressive phenotype., Experimental Design: Cells constitutively expressing physiologic levels of ER-harboring activating LBD mutations were generated and characterized for viability, invasiveness, and tumor formation in vivo . Gene expression profile was studied using microarray and RNAseq technologies. Metabolic properties of the cells were assessed using global metabolite screen and direct measurement of metabolic activity., Results: Cells expressing mutated ER showed increased proliferation, migration, and in vivo tumorigenicity compared with cells expressing the wild-type ER (WT-ER), even in the presence of estrogen. Expression of the mutated ER was associated with upregulation of genes involved in invasion and metastases, as well as elevation of genes associated with tumor cell metabolism. Indeed, a metabolic examination revealed four distinct metabolic profiles: WT-ER-expressing cells either untreated or estrogen treated and mutated ER-expressing cells either untreated or estrogen treated. Pathway analyses indicated elevated tricarboxylic acid cycle activity of 537S-ER-expressing cells. Thus, while WT-ER cells were mostly glucose-dependent, 537S-ER were not addicted to glucose and were able to utilize glutamine as an alternative carbon source., Conclusions: Taken together, these data indicate estrogen-independent rewiring of breast cancer cell metabolism by LBD-activating mutations. These unique metabolic activities may serve as a potential vulnerability and aid in the development of novel treatment strategies to overcome endocrine resistance., (©2019 American Association for Cancer Research.)
- Published
- 2019
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10. Inhibition of nucleotide pyrophosphatase/phosphodiesterase 1: implications for developing a calcium pyrophosphate deposition disease modifying drug.
- Author
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Danino O, Svetitsky S, Kenigsberg S, Levin A, Journo S, Gold A, Drexler M, Snir N, Elkayam O, Fischer B, and Arad U
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- Calcinosis metabolism, Calcinosis pathology, Cells, Cultured, Chondrocalcinosis metabolism, Chondrocalcinosis pathology, Chondrocytes drug effects, Chondrocytes metabolism, Colorimetry, Humans, Immunoblotting, Phosphoric Diester Hydrolases biosynthesis, Pyrophosphatases biosynthesis, Calcinosis drug therapy, Calcium Pyrophosphate metabolism, Chondrocalcinosis drug therapy, Chondrocytes pathology, Intermediate-Conductance Calcium-Activated Potassium Channels pharmacology, Pyrophosphatases antagonists & inhibitors
- Abstract
Objectives: Calcium pyrophosphate deposition (CPPD) is associated with osteoarthritis and is the cause of a common inflammatory articular disease. Ecto-nucleotide pyrophosphatase/phosphodiesterase 1 (eNPP1) is the major ecto-pyrophosphatase in chondrocytes and cartilage-derived matrix vesicles (MVs). Thus, eNPP1 is a principle contributor to extracellular pyrophosphate levels and a potential target for interventions aimed at preventing CPPD. Recently, we synthesized and described a novel eNPP1-specific inhibitor, SK4A, and we set out to evaluate whether this inhibitor attenuates nucleotide pyrophosphatase activity in human OA cartilage., Methods: Cartilage tissue, chondrocytes and cartilage-derived MVs were obtained from donors with OA undergoing arthroplasty. The effect of SK4A on cell viability was assayed by the XTT method. eNPP1 expression was evaluated by western blot. Nucleotide pyrophosphatase activity was measured by a colorimetric assay and by HPLC analysis of adenosine triphosphate (ATP) levels. ATP-induced calcium deposition in cultured chondrocytes was visualized and quantified with Alizarin red S staining., Results: OA chondrocytes expressed eNPP1 in early passages, but this expression was subsequently lost upon further passaging. Similarly, significant nucleotide pyrophosphatase activity was only detected in early-passage chondrocytes. The eNPP1 inhibitor, SK4A, was not toxic to chondrocytes and stable in culture medium and human plasma. SK4A effectively inhibited nucleotide pyrophosphatase activity in whole cartilage tissue, in chondrocytes and in cartilage-derived MVs and reduced ATP-induced CPPD., Conclusion: Nucleotide analogues such as SK4A may be developed as potent and specific inhibitors of eNPP1 for the purpose of lowering extracellular pyrophosphate levels in human cartilage with the aim of preventing and treating CPPD disease.
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- 2018
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11. Implementation of a European infrastructure for satellite navigation: from system design to advanced technology evaluation
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Provenzano, J. P., primary, Masson, A., additional, Journo, S., additional, Laramas, C., additional, Damidaux, J. I., additional, and Zwolska, F., additional
- Published
- 2000
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12. Mechanisms of endocrine resistance in hormone receptor-positive breast cancer.
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Gao, Yuan, Yu, Yang, Zhang, Mingqing, Yu, Wenjun, and Kang, Lihua
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METASTATIC breast cancer ,HORMONE therapy ,HORMONE receptors ,BREAST cancer ,ESTROGEN receptors - Abstract
Hormone receptor-positive breast cancer may recur or metastasize years or decades after its diagnosis. Furthermore, hormone receptor expression may persist in relapsed or metastatic cancer cells. Endocrine therapy is one of the most efficacious treatments for hormone receptor-positive breast cancers. Nevertheless, a considerable proportion of patients develop resistance to endocrine therapy. Previous studies have identified numerous mechanisms underlying drug resistance, such as epigenetic abnormalities in the estrogen receptor (ER) genome, activation of ER-independent ligands, and alterations in signaling pathways including PI3K/AKT/mTOR, Notch, NF-κB, FGFR, and IRE1-XBP1. This article reviews the mechanisms of endocrine resistance in hormone receptor-positive advanced breast cancer, drawing from previous studies, and discusses the latest research advancements and prospects. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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13. 白蛋白结合型紫杉醇一线治疗中国晚期 胰腺癌的真实世界研究.
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杜娟, 仇鑫, 倪嘉遥, 王俏丽, 同帆, 沙慧子, 朱雅慧, 祁亮, 蔡蔚, 高超, 魏晓为, 陈敏斌, 钱祝银, 蔡茂怀, 陶敏, 王彩莲, 郑国灿, 蒋华, 戴安伟, and 吴骏
- Abstract
Copyright of Chinese Journal of Oncology is the property of Chinese Journal of Oncology / Zhonghua Zhongliu Zazhi and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2024
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14. Calcium pyrophosphate deposition disease: historical overview and potential gaps.
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Pineda, Carlos, Sandoval, Hugo, Pérez-Neri, Iván, Soto-Fajardo, Carina, and Carranza-Enríquez, Fabián
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- 2024
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15. Advances of lncRNA MAFG-AS1 in cancer.
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LI Bing, TIAN Yuan-yuan, SUN Xiao-ning, and WANG Jiao
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LINCRNA ,CARCINOGENESIS ,MEDICAL technology ,PROGNOSIS ,CANCER invasiveness - Abstract
In recent years, with the development of medical technology, the detection rate of cancer is getting higher and higher, and the population of patients is getting younger. Many studies have begun to study the early diagnosis, prognostic monitoring markers and pathogenesis of cancer. In recent years, with the development of bioinformatics technology, lncRNA have gradually attracted the attention of researchers. More and more studies have shown that lncRNA are responsible for various biological functions in the process of cancer progression. lncRNA MAFG-AS1 has been shown to be associated with multiple cancers, function as an oncogene, and is significantly associated with poor clinical features and prognosis. This article reviews the research progress of lncRNA MAFG-AS1 in cancer, hoping to provide some help for the future clinical diagnosis and treatment of cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2024
16. Post‐operative mortality and recurrence patterns in pancreatic cancer according to KRAS mutation and CDKN2A, p53, and SMAD4 expression.
- Author
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Masugi, Yohei, Takamatsu, Manabu, Tanaka, Mariko, Hara, Kensuke, Inoue, Yosuke, Hamada, Tsuyoshi, Suzuki, Tatsunori, Arita, Junichi, Hirose, Yuki, Kawaguchi, Yoshikuni, Nakai, Yousuke, Oba, Atsushi, Sasahira, Naoki, Shimane, Gaku, Takeda, Tsuyoshi, Tateishi, Keisuke, Uemura, Sho, Fujishiro, Mitsuhiro, Hasegawa, Kiyoshi, and Kitago, Minoru
- Subjects
SMAD proteins ,PANCREATIC cancer ,RAS oncogenes ,CANCER prognosis ,POLYMERASE chain reaction ,P16 gene - Abstract
Alterations in KRAS, CDKN2A (p16), TP53, and SMAD4 genes have been major drivers of pancreatic carcinogenesis. The clinical course of patients with pancreatic cancer in relation to these driver alterations has not been fully characterised in large populations. We hypothesised that pancreatic carcinomas with different combinations of KRAS mutation and aberrant expression of CDKN2A, p53, and SMAD4 might show distinctive recurrence patterns and post‐operative survival outcomes. To test this hypothesis, we utilised a multi‐institutional cohort of 1,146 resected pancreatic carcinomas and assessed KRAS mutations by droplet digital polymerase chain reaction and CDKN2A, p53, and SMAD4 expression by immunohistochemistry. Multivariable hazard ratios (HRs) and 95% confidence intervals (CIs) for disease‐free survival (DFS) and overall survival (OS) were computed according to each molecular alteration and the number of altered genes using the Cox regression models. Multivariable competing risks regression analyses were conducted to assess the associations of the number of altered genes with specific patterns of recurrence. Loss of SMAD4 expression was associated with short DFS (multivariable HR, 1.24; 95% CI, 1.09–1.43) and OS times (multivariable HR, 1.27; 95% CI, 1.10–1.46). Compared to cases with 0–2 altered genes, cases with three and four altered genes had multivariable HRs for OS of 1.28 (95% CI, 1.09–1.51) and 1.47 (95% CI, 1.22–1.78), respectively (ptrend < 0.001). Patients with an increasing number of altered genes were more likely to have short DFS time (ptrend = 0.003) and to develop liver metastasis (ptrend = 0.006) rather than recurrence at local or other distant sites. In conclusion, loss of SMAD4 expression and an increasing number of altered genes were associated with unfavourable outcomes in pancreatic cancer patients. This study suggests that the accumulation of the four major driver alterations can confer a high metastatic potential to the liver, thereby impairing post‐operative survival among patients with pancreatic cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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17. PG545 Prevents Osteoarthritis Development by Regulating PI3K/AKT/mTOR Signaling and Activating Chondrocyte Autophagy.
- Author
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Guo, Peiyu, Li, Hua, Wang, Xuming, Li, Xingguo, and Li, Xi
- Subjects
GREEN fluorescent protein ,RAPAMYCIN ,AUTOPHAGY ,JOINT pain ,LENTIVIRUS diseases ,CHONDROGENESIS ,SUPEROXIDE dismutase - Abstract
Introduction: Osteoarthritis (OA) is a degenerative disease common in the elderly and is characterized by joint pain, swelling, and restricted movement. In recent years, heparanase has been reported to play an important role in the development of osteoarthritic cartilage. PG545 is a heparan sulfate mimetic with heparanase inhibitory activity. In this study, the therapeutic effects and possible mechanisms of PG545 were investigated in a chondrocyte injury model induced by interleukin-1β (IL -1β). Methods: Following treatment with PG545 or the autophagy inhibitor 3-methyladenine (3-MA), chondrocyte viability was detected using Cell Counting Kit-8 and fluorescein diacetate/propidium iodide double staining. The apoptosis rate of chondrocytes was determined by flow cytometry. Expression of light chain 3 and P62 was monitored by immunofluorescence labeling. Western blot, lentivirus infection with red fluorescent protein and green fluorescent protein, and quantitative real-time polymerase chain reaction were used to determine the expression levels of chondrocyte markers, apoptosis-related factors, autophagy proteins, and key proteins of the phosphatidylinositol 3-kinase (PI3K)/protein kinase B (Akt)/mammalian target of rapamycin (mTOR) pathway. The expression and activity of stress-specific enzymes such as malondialdehyde, superoxide dismutase, and catalase (CAT) were investigated. Chondrocytes with ATG5 knockdown were used to investigate the relationship between the therapeutic effect of PG545 and autophagy. The therapeutic effect of PG545 was verified in vivo. Results: PG545 had a significant protective effect on chondrocytes by reducing oxidative stress, apoptosis, and degradation of chondrocytes and increasing chondrocyte proliferation. PG545 was effective in inducing autophagy in IL-1β-treated cells, while 3-MA attenuated the effect. The PI3K/Akt/mTOR pathway may be involved in the promotion of autophagy and OA treatment by PG545. Conclusion: PG545 was able to restore impaired autophagy and autophagic flux via the PI3K/Akt/mTOR pathway, thereby delaying the progression of OA, suggesting that PG545 may be a novel therapeutic approach for OA. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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18. Enpp1 deficiency caused chondrocyte apoptosis by inhibiting AMPK signaling pathway.
- Author
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Gao, Zhiqiang, Wang, Qiang, Guo, Kai, Li, Xinhua, and Huang, Yufeng
- Subjects
CARTILAGE cells ,KNEE osteoarthritis ,IN vitro studies ,ANIMAL experimentation ,AMP-activated protein kinases ,APOPTOSIS ,CELLULAR signal transduction ,OSTEOARTHRITIS ,RESEARCH funding ,ESTERASES ,PHENOTYPES ,PHOSPHORYLATION - Abstract
Objective and background: The deficiency of ectonucleotide pyrophosphatase/phosphodiesterase 1 (Enpp1) causes the phenotype similar to knee osteoarthritis (OA). However, the molecular mechanism is poorly understood. Method: The global deletion of Enpp1 (Enpp1
−/− ) mice was created to analyze the role of Enpp1 in the progress of knee OA. The apoptosis, proliferation and chondrogenic differentiation ability of chondrocytes from wild-type (WT) and Enpp1−/− joints were compared. According to the results of high-throughput quantitative molecular measurements, the proteins of chondrocytes from WT and Enpp1−/− mice were used to explore the mechanism of Enpp1 deficiency-associated knee OA. Result: In Enpp1−/− knee joints, we found significant chondrocyte apoptosis and proteomic results showed that abnormal expression of AMP-activated protein kinase (AMPK) signaling pathway may contribute to this phenotype. In primary chondrocyte cultures in vitro, Enpp1 deletion dramatically enhancing chondrocyte apoptosis. Meanwhile, we found Enpp1 deletion inhibits the phosphorylation of AMPK (P-AMPK). We also found that decreased level of P-AMPK and chondrocyte apoptosis, which are caused by Enpp1 deficiency, can be reversed by Acadesine (AICAR), the activator of AMPK. Conclusion: Consequently, Enpp1 deficiency plays an essential role in knee OA by regulating AMPK signaling pathway. [ABSTRACT FROM AUTHOR]- Published
- 2023
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19. Aged black garlic extract inhibits the growth of estrogen receptor-positive breast cancer cells by downregulating MCL-1 expression through the ROS-JNK pathway.
- Author
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Yang, Qiwei, Li, Fang, Jia, Guohui, and Liu, Rui
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CANCER cells ,BREAST cancer ,GARLIC ,ESTROGEN receptors ,ESTROGEN ,EPITHELIAL-mesenchymal transition ,PROGESTERONE receptors ,BREAST - Abstract
The black garlic is produced from the raw garlic by Milliard reaction at high temperature (~60–90°C) and humidity (~70–90%). In this process, the pungent odor and gastrointestinal irritation effects of the raw garlic are reduced. At the same time, unstable compounds such as allicin are converted into stable organosulfur compounds with antioxidant activity. Previous studies have confirmed that black garlic extract has anti-tumor effects and could inhibit the proliferation of various tumor cells, including breast cancer cells MCF-7. However, the mechanisms of the anti-tumor effects remain unclear. In this study, we found that the black garlic extract could inhibit the proliferation, invasion, and metastasis of estrogen receptor-positive breast cancer cells, promote their apoptosis, and inhibit their epithelial-mesenchymal transition. Mechanistically, the black garlic extract reduced the expression of the anti-apoptotic protein MCL-1, which was achieved by modulating the ROS-JNK signaling pathway. In addition, the black garlic extract also decreased the expression of BCL-2 and increased the expression of BAX and BIM. We also found that the black garlic extract, in combination with venetoclax, a BCL-2 inhibitor, synergistically kills the estrogen receptor-positive breast cancer cells. These results suggested that black garlic extract has great therapeutic value and prospects for estrogen receptor-positive breast cancer treatment. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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20. Oral Treatment with Plant-Derived Exosomes Restores Redox Balance in H 2 O 2 -Treated Mice.
- Author
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Di Raimo, Rossella, Mizzoni, Davide, Spada, Massimo, Dolo, Vincenza, Fais, Stefano, and Logozzi, Mariantonia
- Subjects
ORAL drug administration ,EXOSOMES ,REACTIVE oxygen species ,MICE ,POISONS - Abstract
Plant-derived exosomes (PDEs) are receiving much attention as a natural source of antioxidants. Previous research has shown that PDEs contain a series of bioactives and that their content varies depending on the fruit or vegetable source. It has also been shown that fruits and vegetables derived from organic agriculture produce more exosomes, are safer, free of toxic substances, and contain more bioactives. The aim of this study was to investigate the ability of orally administered mixes of PDE (Exocomplex
® ) to restore the physiological conditions of mice treated for two weeks with hydrogen peroxide (H2 O2 ), compared with mice left untreated after the period of H2 O2 administration and mice that received only water during the experimental period. The results showed that Exocomplex® had a high antioxidant capacity and contained a series of bioactives, including Catalase, Glutathione (GSH), Superoxide Dismutase (SOD), Ascorbic Acid, Melatonin, Phenolic compounds, and ATP. The oral administration of Exocomplex® to the H2 O2 -treated mice re-established redox balance with reduced serum levels of both reactive oxygen species (ROS) and malondialdehyde (MDA), but also a general recovery of the homeostatic condition at the organ level, supporting the future use of PDE for health care. [ABSTRACT FROM AUTHOR]- Published
- 2023
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21. Network pharmacology of apigeniflavan: a novel bioactive compound of Trema orientalis Linn. in the treatment of pancreatic cancer through bioinformatics approaches.
- Author
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Das, Richa, Agrawal, Shreni, Kumar, Pradeep, Singh, Amit Kumar, Shukla, Praveen Kumar, Bhattacharya, Indrani, Tiwari, Kavindra Nath, Mishra, Sunil Kumar, and Tripathi, Amit Kumar
- Subjects
PANCREATIC cancer ,INTERNET servers ,PLANT cell cycle ,BIOACTIVE compounds ,CANCER treatment ,PROTEIN-protein interactions - Abstract
Pancreatic cancer is the seventh most prevalent cause of mortality globally. Since time immemorial, plant-derived products have been in use as therapeutic agents due to the existence of biologically active molecules called secondary metabolites. Flavonoids obtained from plants participate in cell cycle arrest, induce autophagy and apoptosis, and decrease oxidative stress in pancreatic cancer. The present study involves network pharmacology-based study of the methanolic leaf extract of Trema orientalis (MLETO) Linn. From the high-resolution mass spectrometry (HRMS) analysis, 21 nucleated flavonoids were screened out, of which only apigeniflavan was selected for further studies because it followed Lipinski's rule and showed no toxicity. The pharmacokinetics and physiochemical characteristics of apigeniflavan were performed using the online web servers pkCSM, Swiss ADME, and ProTox-II. This is the first in silico study to report the efficiency of apigeniflavan in pancreatic cancer treatment. The targets of apigeniflavan were fetched from SwissTargetPrediction database. The targets of pancreatic cancer were retrieved from DisGeNET and GeneCards. The protein–protein interaction of the common genes using Cytoscape yielded the top five hub genes: KDR, VEGFA, AKT1, SRC, and ESR1. Upon molecular docking, the lowest binding energies corresponded to best docking score which indicated the highest protein–ligand affinity. Kyoto Encyclopaedia of Genes and Genomes (KEGG) database was employed to see the involvement of hub genes in pathways related to pancreatic cancer. The following, pancreatic cancer pathway, MAPK, VEGF, PI3K–Akt, and ErbB signaling pathways, were found to be significant. Our results indicate the involvement of the hub genes in tumor growth, invasion and proliferation in the above-mentioned pathways, and therefore necessitating their downregulation. Moreover, apigeniflavan can flourish as a promising drug for the treatment of pancreatic cancer in future. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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22. Liver tropism of ER mutant breast cancer is characterized by unique molecular changes and immune infiltration.
- Author
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Wu Y, Li Z, Lee AV, Oesterreich S, and Luo B
- Subjects
- Humans, Female, Gene Expression Regulation, Neoplastic, DNA Copy Number Variations, Gene Expression Profiling, Biomarkers, Tumor genetics, Liver pathology, Liver immunology, Liver metabolism, Transcriptome, Breast Neoplasms genetics, Breast Neoplasms pathology, Breast Neoplasms immunology, Estrogen Receptor alpha genetics, Estrogen Receptor alpha metabolism, Mutation, Liver Neoplasms secondary, Liver Neoplasms genetics, Liver Neoplasms immunology, Liver Neoplasms pathology
- Abstract
Purpose: Hotspot estrogen receptor alpha (ER/ESR1) mutations are recognized as the driver for both endocrine resistance and metastasis in advanced ER-positive (ER+) breast cancer, but their contributions to metastatic organ tropism remain insufficiently understood. In this study, we aim to comprehensively profile the organotropic metastatic pattern for ESR1 mutant breast cancer., Methods: The organ-specific metastatic pattern of ESR1 mutant breast cancer was delineated using multi-omics data from multiple publicly available cohorts of ER+ metastatic breast cancer patients. Gene mutation/copy number variation (CNV) and differential gene expression analyses were performed to identify the genomic and transcriptomic alterations uniquely associated with ESR1 mutant liver metastasis. Upstream regulator, downstream pathway, and immune infiltration analysis were conducted for subsequent mechanistic investigations., Results: ESR1 mutation-driven liver tropism was revealed by significant differences, encompassing a higher prevalence of liver metastasis in patients with ESR1 mutant breast cancer and an enrichment of mutations in liver metastatic samples. The significant enrichment of AGO2 copy number amplifications (CNAs) and multiple gene expression changes were revealed uniquely in ESR1 mutant liver metastasis. We also unveiled alterations in downstream signaling pathways and immune infiltration, particularly an enrichment of neutrophils, suggesting potential therapeutic vulnerabilities., Conclusion: Our data provide a comprehensive characterization of the behaviors and mechanisms of ESR1 mutant liver metastasis, paving the way for the development of personalized therapy to target liver metastasis for patients with ESR1 mutant breast cancer., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
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- 2024
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23. Genomics of Breast Cancer Brain Metastases: A Meta-Analysis and Therapeutic Implications.
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Nguyen, Thuy Thi, Hamdan, Diaddin, Angeli, Eurydice, Feugeas, Jean-Paul, Le, Quang Van, Pamoukdjian, Frédéric, and Bousquet, Guilhem
- Subjects
ONLINE information services ,META-analysis ,GENETIC mutation ,BLOOD-brain barrier ,SYSTEMATIC reviews ,METASTASIS ,BRAIN tumors ,GENOMICS ,DISEASE prevalence ,RESEARCH funding ,MEDLINE ,BREAST tumors - Abstract
Simple Summary: Breast cancer brain metastases are a challenging daily practice, and the biological link between gene mutations and metastatic spread to the brain remains to be determined. We performed a meta-analysis on genomic data obtained from primary tumors, extracerebral metastases and brain metastases, to identify gene alterations associated with brain metastatic processes. Fifty-seven publications were selected for this meta-analysis, including 37,218 patients in all, 11,906 primary tumor samples, 5541 extracerebral metastasis samples, and 1485 brain metastasis samples. Using a threshold of 1% for mutation prevalence in the primary tumor, we identified 53 genes, among which 21 were associated with significant differences in prevalence between subgroups (primary tumor, extracerebral metastases, and brain metastases). In particular, we identified six genes with a higher mutation prevalence in brain metastases than in extracerebral metastases: ESR1, ERBB2, EGFR, PTEN, BRCA2 and NOTCH1. These mutated genes could be responsible for the crossing of the blood–brain barrier by cancer cells, and thus have considerable potential therapeutic implications, underlining the added value of obtaining biopsies from brain metastases to develop personalized treatments. Breast cancer brain metastases are a challenging daily practice, and the biological link between gene mutations and metastatic spread to the brain remains to be determined. Here, we performed a meta-analysis on genomic data obtained from primary tumors, extracerebral metastases and brain metastases, to identify gene alterations associated with metastatic processes in the brain. Articles with relevant findings were selected using Medline via PubMed, from January 1999 up to February 2022. A critical review was conducted according to the Preferred Reporting Items for Systematic Review and Meta-analysis statement (PRISMA). Fifty-seven publications were selected for this meta-analysis, including 37,218 patients in all, 11,906 primary tumor samples, 5541 extracerebral metastasis samples, and 1485 brain metastasis samples. We report the overall and sub-group prevalence of gene mutations, including comparisons between primary tumors, extracerebral metastases and brain metastases. In particular, we identified six genes with a higher mutation prevalence in brain metastases than in extracerebral metastases, with a potential role in metastatic processes in the brain: ESR1, ERBB2, EGFR, PTEN, BRCA2 and NOTCH1. We discuss here the therapeutic implications. Our results underline the added value of obtaining biopsies from brain metastases to fully explore their biology, in order to develop personalized treatments. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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24. Integrated genomic analysis to identify druggable targets for pancreatic cancer.
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Mugiyanto, Eko, Adikusuma, Wirawan, Irham, Lalu Muhammad, Wan-Chen Huang, Wei-Chiao Chang, and Chun-Nan Kuo
- Subjects
GENOMICS ,PANCREATIC cancer ,DRUG repositioning ,FULVESTRANT ,DRUG target - Abstract
According to the National Comprehensive Cancer Network and the American Society of Clinical Oncology, the standard treatment for pancreatic cancer (PC) is gemcitabine and fluorouracil. Other chemotherapeutic agents have been widely combined. However, drug resistance remains a huge challenge, leading to the ineffectiveness of cancer therapy. Therefore, we are trying to discover new treatments for PC by utilizing genomic information to identify PCassociated genes as well as drug target genes for drug repurposing. Genomic information from a public database, the cBio Cancer Genomics Portal, was employed to retrieve the somatic mutation genes of PC. Five functional annotations were applied to prioritize the PC risk genes: Kyoto Encyclopedia of Genes and Genomes; biological process; knockout mouse; Gene List Automatically Derived For You; and Gene Expression Omnibus Dataset. DrugBank database was utilized to extract PC drug targets. To narrow down the most promising drugs for PC, CMap Touchstone analysis was applied. Finally, ClinicalTrials.gov and a literature review were used to screen the potential drugs under clinical and preclinical investigation. Here, we extracted 895 PC-associated genes according to the cBioPortal database and prioritized them by using five functional annotations; 318 genes were assigned as biological PC risk genes. Further, 216 genes were druggable according to the DrugBank database. CMap Touchstone analysis indicated 13 candidate drugs for PC. Among those 13 drugs, 8 drugs are in the clinical trials, 2 drugs were supported by the preclinical studies, and 3 drugs are with no evidence status for PC. Importantly, we found that midostaurin (targeted PRKA) and fulvestrant (targeted ESR1) are promising candidate drugs for PC treatment based on the genomic-driven drug repurposing pipelines. In short, integrated analysis using a genomic information database demonstrated the viability for drug repurposing. We proposed two drugs (midostaurin and fulvestrant) as promising drugs for PC. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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25. The Liver Pre-Metastatic Niche in Pancreatic Cancer: A Potential Opportunity for Intervention.
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Gumberger, Peter, Bjornsson, Bergthor, Sandström, Per, Bojmar, Linda, and Zambirinis, Constantinos P.
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PANCREATIC tumors ,LIVER tumors ,INFLAMMATION ,METASTASIS ,IMMUNOSUPPRESSION ,EXTRACELLULAR space - Abstract
Simple Summary: Patients with pancreatic cancer have a very poor chance of long-term survival. This is usually due to advanced disease at the time of diagnosis, which commonly includes occult or clinically obvious liver metastases. Emerging evidence suggests that organs that develop metastases exhibit microscopic changes that favor metastatic growth, collectively known as "pre-metastatic niches". Such pre-metastatic niches result from various signals originating from the primary pancreatic tumor that reprogram immune and other cells in the liver and other organs, thus enabling the growth of cancer cells once they spread. In this review, we summarize the latest discoveries regarding the liver pre-metastatic niche in pancreatic cancer. We are optimistic that intensified future research will help to reveal powerful diagnostic markers and targetable therapeutic pathways, which will ultimately benefit patients. Cancer-related mortality is primarily a consequence of metastatic dissemination and associated complications. Pancreatic ductal adenocarcinoma (PDAC) is one of the most lethal malignancies and tends to metastasize early, especially in the liver. Emerging evidence suggests that organs that develop metastases exhibit microscopic changes that favor metastatic growth, collectively known as "pre-metastatic niches". By definition, a pre-metastatic niche is chronologically established before overt metastatic outgrowth, and its generation involves the release of tumor-derived secreted factors that modulate cells intrinsic to the recipient organ, as well as recruitment of additional cells from tertiary sites, such as bone marrow—all orchestrated by the primary tumor. The pre-metastatic niche is characterized by tumor-promoting inflammation with tumor-supportive and immune-suppressive features, remodeling of the extracellular matrix, angiogenic modulation and metabolic alterations that support growth of disseminated tumor cells. In this paper, we review the current state of knowledge of the hepatic pre-metastatic niche in PDAC and attempt to create a framework to guide future diagnostic and therapeutic studies. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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26. The Extracellular Matrix of Articular Cartilage Controls the Bioavailability of Pericellular Matrix-Bound Growth Factors to Drive Tissue Homeostasis and Repair.
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Vincent, Tonia L., McClurg, Oliver, and Troeberg, Linda
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ARTICULAR cartilage ,GROWTH factors ,EXTRACELLULAR matrix ,MECHANICAL loads ,JOINTS (Anatomy) ,CARTILAGE - Abstract
The extracellular matrix (ECM) has long been regarded as a packing material; supporting cells within the tissue and providing tensile strength and protection from mechanical stress. There is little surprise when one considers the dynamic nature of many of the individual proteins that contribute to the ECM, that we are beginning to appreciate a more nuanced role for the ECM in tissue homeostasis and disease. Articular cartilage is adapted to be able to perceive and respond to mechanical load. Indeed, physiological loads are essential to maintain cartilage thickness in a healthy joint and excessive mechanical stress is associated with the breakdown of the matrix that is seen in osteoarthritis (OA). Although the trigger by which increased mechanical stress drives catabolic pathways remains unknown, one mechanism by which cartilage responds to increased compressive load is by the release of growth factors that are sequestered in the pericellular matrix. These are heparan sulfate-bound growth factors that appear to be largely chondroprotective and displaced by an aggrecan-dependent sodium flux. Emerging evidence suggests that the released growth factors act in a coordinated fashion to drive cartilage repair. Thus, we are beginning to appreciate that the ECM is the key mechano-sensor and mechano-effector in cartilage, responsible for directing subsequent cellular events of relevance to joint health and disease. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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27. Estrogens and Progestins Cooperatively Shift Breast Cancer Cell Metabolism.
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Ward, Ashley V., Matthews, Shawna B., Fettig, Lynsey M., Riley, Duncan, Finlay-Schultz, Jessica, Paul, Kiran V., Jackman, Matthew, Kabos, Peter, MacLean, Paul S., and Sartorius, Carol A.
- Subjects
BREAST tumor prevention ,LIQUID chromatography ,ESTROGEN ,METABOLISM ,ANTINEOPLASTIC agents ,MASS spectrometry ,CELL lines ,PROGESTATIONAL hormones ,METABOLITES ,GLYCOLYSIS ,PHARMACODYNAMICS - Abstract
Simple Summary: Breast cancers are largely controlled by hormones, expressing abundant receptors for estrogen (ER) and progesterone (PR). Reprogramming of energy metabolism is a common feature of tumors, yet how estrogen and progestins (synthetic progesterone drugs) control breast cancer cell metabolism, particularly in combination, is understudied. Here we evaluated the impact of estrogens and progestins, alone or together, on breast cancer cell metabolism. Our results show that hormones significantly impact metabolism, especially in combination. Estrogens tend to target tumor-promoting genes that alter glucose metabolism while progestins target fat storage. Combined hormone treatment increases both glucose metabolism and fat storage, features advantageous for tumor progression. These results may explain, in part, why estrogen-progestin combinations increase breast cancer incidence in post-menopausal women. Targeting hormone-regulated metabolism is a potential novel therapeutic strategy for ER+PR+ breast cancer. Metabolic reprogramming remains largely understudied in relation to hormones in estrogen receptor (ER) and progesterone receptor (PR) positive breast cancer. In this study, we investigated how estrogens, progestins, or the combination, impact metabolism in three ER and PR positive breast cancer cell lines. We measured metabolites in the treated cells using ultra-performance liquid chromatography coupled with mass spectrometry (UPLC-MS). Top metabolic processes upregulated with each treatment involved glucose metabolism, including Warburg effect/glycolysis, gluconeogenesis, and the pentose phosphate pathway. RNA-sequencing and pathway analysis on two of the cell lines treated with the same hormones, found estrogens target oncogenes, such as MYC and PI3K/AKT/mTOR that control tumor metabolism, while progestins increased genes associated with fatty acid metabolism, and the estrogen/progestin combination additionally increased glycolysis. Phenotypic analysis of cell energy metabolism found that glycolysis was the primary hormonal target, particularly for the progestin and estrogen-progestin combination. Transmission electron microscopy found that, compared to vehicle, estrogens elongated mitochondria, which was reversed by co-treatment with progestins. Progestins promoted lipid storage both alone and in combination with estrogen. These findings highlight the shift in breast cancer cell metabolism to a more glycolytic and lipogenic phenotype in response to combination hormone treatment, which may contribute to a more metabolically adaptive state for cell survival. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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28. Mathematical model for the estrogen paradox in breast cancer treatment.
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Ouifki, Rachid and Oke, Segun I.
- Abstract
Estrogen is known to stimulate the growth of breast cancer, but is also effective in treating the disease. This is referred to as the“estrogen paradox”. Furthermore, short-term treatment with estrogen can successfully eliminate breast cancer, whereas long-term treatment can cause cancer recurrence. Studies highlighted clinical correlations between estrogen and the protein p53 which plays a pivotal role in breast cancer suppression. We sought to investigate how the interplay between estrogen and p53 impacts the dynamics of breast cancer, and further explore if this could be a plausible explanation for the estrogen paradox and the paradoxical tumor recurrence that results from prolonged treatment with estrogen. For this, we propose a novel ODE based mathematical model that accounts for dormant and active cancer cells, along with the estrogen hormone and the p53 protein. We analyze the model’s global stability behavior using the Poincaré-Bendixson theorem and results from differential inequalities. We also perform a bifurcation analysis and carry out numerical simulations that elucidate the roles of estrogen and p53 in the estrogen paradox and its long term estrogen paradoxical effect. The mathematical and numerical analyses suggest that the apparent paradoxical role of estrogen could be the result of an interplay between estrogen and p53, and provide explicit conditions under which the paradoxical effect of long-term treatment may be prevented. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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29. The Synthesis of Nucleoside 2',3'-Cyclic Monophosphate Analogs with Regio- and Stereospecificity.
- Author
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Nassir, Molhm, Saady, Abed, Cohen, Natalie Pariene, and Fischer, Bilha
- Published
- 2021
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30. A Novel Integrated Metabolism-Immunity Gene Expression Model Predicts the Prognosis of Lung Adenocarcinoma Patients.
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Chen, Songming, Duan, Yumei, Wu, Yanhao, Yang, Desong, and An, Jian
- Subjects
SURVIVAL rate ,GENE expression ,PROPORTIONAL hazards models ,PROGNOSIS ,ACTIVATED carbon ,ADENOCARCINOMA - Abstract
Background: Although multiple metabolic pathways are involved in the initiation, progression, and therapy of lung adenocarcinoma (LUAD), the tumor microenvironment (TME) for immune cell infiltration that is regulated by metabolic enzymes has not yet been characterized. Methods: 517 LUAD samples and 59 non-tumor samples were obtained from The Cancer Genome Atlas (TCGA) database as the training cohort. Kaplan-Meier analysis and Univariate Cox analysis were applied to screen the candidate metabolic enzymes for their role in relation to survival rate in LUAD patients. A prognostic metabolic enzyme signature, termed the metabolic gene risk score (MGRS), was established based on multivariate Cox proportional hazards regression analysis and was verified in an independent test cohort, GSE31210. In addition, we analyzed the immune cell infiltration characteristics in patients grouped by their Risk Score. Furthermore, the prognostic value of these four enzymes was verified in another independent cohort by immunohistochemistry and an optimized model of the metabolic-immune protein risk score (MIPRS) was constructed. Results: The MGRS model comprising 4 genes (TYMS, NME4, LDHA , and SMOX) was developed to classify patients into high-risk and low-risk groups. Patients with a high-risk score had a poor prognosis and exhibited activated carbon and nucleotide metabolism, both of which were associated with changes to TME immune cell infiltration characteristics. In addition, the optimized MIPRS model showed more accurate predictive power in prognosis of LUAD. Conclusion: Our study revealed an integrated metabolic enzyme signature as a reliable prognostic tool to accurately predict the prognosis of LUAD. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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31. ESR1 as a recurrence-related gene in intrahepatic cholangiocarcinoma: a weighted gene coexpression network analysis.
- Author
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Li, Fengwei, Chen, Qinjunjie, Yang, Yang, Li, Meihui, Zhang, Lei, Yan, Zhenlin, Zhang, Junjie, and Wang, Kui
- Subjects
GENES ,GENE regulatory networks ,JAK-STAT pathway ,GENE ontology ,CHOLANGIOCARCINOMA ,TUMOR suppressor proteins ,PROGNOSIS - Abstract
Background: Intrahepatic cholangiocarcinoma (iCCA) is the second most common malignant hepatic tumor and has a high postoperative recurrence rate and a poor prognosis. The key roles of most tumor recurrence-associated molecules in iCCA remain unclear. This study aimed to explore hub genes related to the postsurgical recurrence of iCCA. Method: Differentially expressed genes (DEGs) between iCCA samples and normal liver samples were screened from The Cancer Genome Atlas (TCGA) database and used to construct a weighted gene coexpression network. Module-trait correlations were calculated to identify the key module related to recurrence in iCCA patients. Genes in the key module were subjected to functional enrichment analysis, and candidate hub genes were filtered through coexpression and protein–protein interaction (PPI) network analysis. Validation studies were conducted to detect the "real" hub gene. Furthermore, the biological functions and the underlying mechanism of the real hub gene in iCCA tumorigenesis and progression were determined via in vitro experiments. Results: A total of 1019 DEGs were filtered and used to construct four coexpression modules. The red module, which showed the highest correlations with the recurrence status, family history, and day to death of patients, was identified as the key module. Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses demonstrated that genes in the red module were enriched in genes and pathways related to tumorigenesis and tumor progression. We performed validation studies and identified estrogen receptor 1 (ESR1), which significantly impacted the prognosis of iCCA patients, as the real hub gene related to the recurrence of iCCA. The in vitro experiments demonstrated that ESR1 overexpression significantly suppressed cell proliferation, migration, and invasion, whereas ESR1 knockdown elicited opposite effects. Further investigation into the mechanism demonstrated that ESR1 acts as a tumor suppressor by inhibiting the JAK/STAT3 signaling pathway. Conclusions: ESR1 was identified as the real hub gene related to the recurrence of iCCA that plays a critical tumor suppressor role in iCCA progression. ESR1 significantly impacts the prognosis of iCCA patients and markedly suppresses cholangiocarcinoma cell proliferation, migration and invasion by inhibiting JAK/STAT3 signaling pathway. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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32. Insulin Resistance in Osteoarthritis: Similar Mechanisms to Type 2 Diabetes Mellitus.
- Author
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Tchetina, Elena V, Markova, Galina A, and Sharapova, Eugeniya P
- Abstract
Osteoarthritis (OA) and type 2 diabetes mellitus (T2D) are two of the most widespread chronic diseases. OA and T2D have common epidemiologic traits, are considered heterogenic multifactorial pathologies that develop through the interaction of genetic and environmental factors, and have common risk factors. In addition, both of these diseases often manifest in a single patient. Despite differences in clinical manifestations, both diseases are characterized by disturbances in cellular metabolism and by an insulin-resistant state primarily associated with the production and utilization of energy. However, currently, the primary cause of OA development and progression is not clear. In addition, although OA is manifested as a joint disease, evidence has accumulated that it affects the whole body. As pathological insulin resistance is viewed as a driving force of T2D development, now, we present evidence that the molecular and cellular metabolic disturbances associated with OA are linked to an insulin-resistant state similar to T2D. Moreover, the alterations in cellular energy requirements associated with insulin resistance could affect many metabolic changes in the body that eventually result in pathology and could serve as a unified mechanism that also functions in many metabolic diseases. However, these issues have not been comprehensively described. Therefore, here, we discuss the basic molecular mechanisms underlying the pathological processes associated with the development of insulin resistance; the major inducers, regulators, and metabolic consequences of insulin resistance; and instruments for controlling insulin resistance as a new approach to therapy. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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33. Adenine-(methoxy)-ethoxy-Pα,α-dithio-triphosphate inhibits pathologic calcium pyrophosphate deposition in osteoarthritic human chondrocytes.
- Author
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Nassir, Molhm, Mirza, Salahuddin, Arad, Uri, Lee, Sangyong, Rafehi, Muhammad, Yaw Attah, Isaac, Renn, Christian, Zimmermann, Herbert, Pelletier, Julie, Sévigny, Jean, Müller, Christa E., and Fischer, Bilha
- Published
- 2019
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34. N-Dimensional LLL Reduction Algorithm with Pivoted Reflection.
- Author
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Deng, Zhongliang, Zhu, Di, and Yin, Lu
- Subjects
MIMO systems ,LATTICE theory ,GLOBAL Positioning System ,LEAST squares ,PROBLEM solving ,ALGORITHMS - Abstract
The Lenstra-Lenstra-Lovász (LLL) lattice reduction algorithm and many of its variants have been widely used by cryptography, multiple-input-multiple-output (MIMO) communication systems and carrier phase positioning in global navigation satellite system (GNSS) to solve the integer least squares (ILS) problem. In this paper, we propose an n-dimensional LLL reduction algorithm (n-LLL), expanding the Lovász condition in LLL algorithm to n-dimensional space in order to obtain a further reduced basis. We also introduce pivoted Householder reflection into the algorithm to optimize the reduction time. For an m-order positive definite matrix, analysis shows that the n-LLL reduction algorithm will converge within finite steps and always produce better results than the original LLL reduction algorithm with n > 2. The simulations clearly prove that n-LLL is better than the original LLL in reducing the condition number of an ill-conditioned input matrix with 39% improvement on average for typical cases, which can significantly reduce the searching space for solving ILS problem. The simulation results also show that the pivoted reflection has significantly declined the number of swaps in the algorithm by 57%, making n-LLL a more practical reduction algorithm. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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35. ESR1 mutations and therapeutic resistance in metastatic breast cancer: progress and remaining challenges.
- Author
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Herzog SK and Fuqua SAW
- Subjects
- Breast Neoplasms genetics, Breast Neoplasms metabolism, Breast Neoplasms pathology, Estrogen Receptor alpha metabolism, Female, Humans, Neoplasm Metastasis, Breast Neoplasms drug therapy, Drug Resistance, Neoplasm, Estrogen Receptor alpha genetics, Molecular Targeted Therapy methods, Mutation
- Abstract
Breast cancer accounts for 25% of the cancers in women worldwide. The most common subtype of breast cancer diagnosed is hormone receptor positive, which expresses the oestrogen receptor (ER). Targeting of the ER with endocrine therapy (ET) is the current standard of care for ER-positive (ER+) breast cancer, reducing the mortality by up to 40%. Resistance to ET, however, remains a major issue for ER + breast cancer, leading to recurrence and metastasis. One major driver of ET resistance is mutations in the ER gene (ESR1) leading to constitutive transcriptional activity and reduced ET sensitivity. These mutations are particularly detrimental in metastatic breast cancer (MBC) as they are present in as high as 36% of the patients. This review summarises the pre-clinical characterisation of ESR1 mutations and their association with clinical outcomes in MBC and primary disease. The clinically approved and investigational therapeutic options for ESR1 mutant breast cancer and the current clinical trials evaluating ESR1 mutations and ET resistance are also discussed. Finally, this review addresses pre-clinical models and multi-'omics' approaches for developing the next generation of therapeutics for ESR1 mutant and ET-resistant breast cancer., (© 2021. The Author(s), under exclusive licence to Springer Nature Limited.)
- Published
- 2022
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36. Klotho rewires cellular metabolism of breast cancer cells through alteration of calcium shuttling and mitochondrial activity.
- Author
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Shmulevich R, Nissim TB, Wolf I, Merenbakh-Lamin K, Fishman D, Sekler I, and Rubinek T
- Subjects
- Animals, Breast Neoplasms genetics, Breast Neoplasms pathology, Glucuronidase genetics, Humans, Klotho Proteins, MCF-7 Cells, Mice, Mitochondria genetics, Mitochondria pathology, Neoplasm Proteins genetics, Breast Neoplasms metabolism, Calcium metabolism, Calcium Signaling, Glucuronidase metabolism, Mitochondria metabolism, Neoplasm Proteins metabolism
- Abstract
Klotho is a transmembrane protein, which can be shed and act as a circulating hormone and is involved in regulating cellular calcium levels and inhibition of the PI3K/AKT pathway. As a longevity hormone, it protects normal cells from oxidative stress, and as a tumor suppressor it inhibits growth of cancer cells. Mechanisms governing these differential activities have not been addressed. Altered cellular metabolism is a hallmark of cancer and dysregulation of mitochondrial activity is a hallmark of aging. We hypothesized that klotho exerts its differential effects through regulation of these two hallmarks. Treatment with klotho inhibited glycolysis, reduced mitochondrial activity and membrane potential only in cancer cells. Accordingly, global metabolic screen revealed that klotho altered pivotal metabolic pathways, amongst them glycolysis and tricarboxylic acid cycle in breast cancer cells. Alteration of metabolic activity and increased AMP/ATP ratio lead to LKB1-dependent AMPK activation. Indeed, klotho induced AMPK phosphorylation; furthermore, inhibition of LKB1 partially abolished klotho's tumor suppressor activity. By diminishing deltapsi (Δψ) klotho also inhibited mitochondria Ca
2+ shuttling thereby impairing mitochondria communication with SOCE leading to reduced Ca2+ influx by SOCE channels. The reduced SOCE was followed by ER Ca2+ depletion and stress. These data delineate mechanisms mediating the differential effects of klotho toward cancer versus normal cells, and indicate klotho as a potent regulator of metabolic activity.- Published
- 2020
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37. Research Status and Developing Trend of Uploading Schemes for Satellite Navigation Systems.
- Author
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JIN Guoping, LIU Qinli, and SANG Huaisheng
- Abstract
An uploading system is an indispensable part of a satellite navigation system because it is a lifeline of the system. This paper studies the uploading schemes used by foreign global and regional satellite navigation systems. Global Positioning System (GPS) is transiting from GPS II to GPS III. GPS II uses a signal-satellite direct uploading scheme and sets uploading sites globally. But GPS III will use a scheme based on data transmission via its inter-satellite links and sets sites only in USA. Galileo uses the same scheme as GPS II. Russia's Global Navigation Satellite System(GLONASS) and Quasi-Zenith Satellite System(QZSS) and Indian Regional Navigational Satellite System(IRNSS) use the signal-satellite direct uploading scheme and set native sites only. Today, with the studying, scheduling and developing inter-satellite link of global systems, the scheme based on inter-satellite links will certainly become a trend of the uploading scheme of a global system and a cooperation among uploading links and a high-speed transmission will be key technologies inevitably. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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38. Requirements for Description of GRFS Systems.
- Author
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Progri, Ilir
- Abstract
Requirements for description of Geolocation of RF Signals (GRFS) systems offer an overview of the best practices, classifications, visual interpretation, very important detailed descriptive ingredients, and innovative techniques in the art and science of GRFS over the last 20 years. In Chap. 1 we gave a very brief description of the GRFS systems which consisted only of the description from the local coordinate point of view into: (1) indoors, (2) urban, (3) suburban, (4) global, and (5) satellite. In this chapter, in addition to local coordinate environment description, we are going to add the global coordinate environment description which consists of: (1) water, (2) ground, (3) air, and (4) space descriptions. As we are going to see further in this chapter, there are 39 typical principle system illustration case studies for GRFS systems: (1) four correspond to requirements for description of indoor GRFS systems in Sect. 2.3; (2) eight correspond to requirements for description of urban GRFS systems in Sect. 2.4; (3) nine correspond to requirements for description of suburban GRFS systems in Sect. 2.5; (4) nine correspond to requirements for description of global GRFS systems in Sect. 2.6; and (5) nine correspond to requirements for description of satellite GRFS systems. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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39. Histone Deacetylase Inhibitors Downregulate Calcium Pyrophosphate Crystal Formation in Human Articular Chondrocytes.
- Author
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Chang, Chi-Ching, Lee, Kun-Lin, Chan, Tze-Sian, Chung, Chia-Chen, and Liang, Yu-Chih
- Subjects
HISTONE deacetylase inhibitors ,TRANSFORMING growth factors ,CALCIUM ,HISTONE deacetylase ,CRYSTALS ,PYROPHOSPHATES - Abstract
Calcium pyrophosphate (CPP) deposition disease (CPPD) is a form of CPP crystal-induced arthritis. A high concentration of extracellular pyrophosphate (ePPi) in synovial fluid is positively correlated with the formation of CPP crystals, and ePPi can be upregulated by ankylosis human (ANKH) and ectonucleotide pyrophosphatase 1 (ENPP1) and downregulated by tissue non-specific alkaline phosphatase (TNAP). However, there is currently no drug that eliminates CPP crystals. We explored the effects of the histone deacetylase (HDAC) inhibitors (HDACis) trichostatin A (TSA) and vorinostat (SAHA) on CPP formation. Transforming growth factor (TGF)-β1-treated human primary cultured articular chondrocytes (HC-a cells) were used to increase ePPi and CPP formation, which were determined by pyrophosphate assay and CPP crystal staining assay, respectively. Artificial substrates thymidine 5′-monophosphate p-nitrophenyl ester (p-NpTMP) and p-nitrophenyl phosphate (p-NPP) were used to estimate ENPP1 and TNAP activities, respectively. The HDACis TSA and SAHA significantly reduced mRNA and protein expressions of ANKH and ENPP1 but increased TNAP expression in a dose-dependent manner in HC-a cells. Further results demonstrated that TSA and SAHA decreased ENPP1 activity, increased TNAP activity, and limited levels of ePPi and CPP. As expected, both TSA and SAHA significantly increased the acetylation of histones 3 and 4 but failed to block Smad-2 phosphorylation induced by TGF-β1. These results suggest that HDACis prevented the formation of CPP by regulating ANKH, ENPP1, and TNAP expressions and can possibly be developed as a potential drug to treat or prevent CPPD. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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40. Regulation of FGF-2, FGF-18 and Transcription Factor Activity by Perlecan in the Maturational Development of Transitional Rudiment and Growth Plate Cartilages and in the Maintenance of Permanent Cartilage Homeostasis.
- Author
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Hayes, Anthony J., Whitelock, John, and Melrose, James
- Subjects
ENDOCHONDRAL ossification ,GROWTH plate ,TRANSCRIPTION factors ,CARTILAGE ,HOMEOSTASIS ,ARTICULAR cartilage ,HYPERTROPHIC scars - Abstract
The aim of this study was to highlight the roles of perlecan in the regulation of the development of the rudiment developmental cartilages and growth plate cartilages, and also to show how perlecan maintains permanent articular cartilage homeostasis. Cartilage rudiments are transient developmental templates containing chondroprogenitor cells that undergo proliferation, matrix deposition, and hypertrophic differentiation. Growth plate cartilage also undergoes similar changes leading to endochondral bone formation, whereas permanent cartilage is maintained as an articular structure and does not undergo maturational changes. Pericellular and extracellular perlecan-HS chains interact with growth factors, morphogens, structural matrix glycoproteins, proteases, and inhibitors to promote matrix stabilization and cellular proliferation, ECM remodelling, and tissue expansion. Perlecan has mechanotransductive roles in cartilage that modulate chondrocyte responses in weight-bearing environments. Nuclear perlecan may modulate chromatin structure and transcription factor access to DNA and gene regulation. Snail-1, a mesenchymal marker and transcription factor, signals through FGFR-3 to promote chondrogenesis and maintain Acan and type II collagen levels in articular cartilage, but prevents further tissue expansion. Pre-hypertrophic growth plate chondrocytes also express high Snail-1 levels, leading to cessation of Acan and CoI2A1 synthesis and appearance of type X collagen. Perlecan differentially regulates FGF-2 and FGF-18 to maintain articular cartilage homeostasis, rudiment and growth plate cartilage growth, and maturational changes including mineralization, contributing to skeletal growth. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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41. Osteocytic Pericellular Matrix (PCM): Accelerated Degradation under In Vivo Loading and Unloading Conditions Using a Novel Imaging Approach.
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Pei, Shaopeng, Wang, Shubo, Martinez, Jerahme R., Parajuli, Ashutosh, Kirn-Safran, Catherine B., Farach-Carson, Mary C., Lu, X. Lucas, and Wang, Liyun
- Subjects
MOLECULAR sieves ,OSTEOCYTES ,HINDLIMB - Abstract
The proteoglycan-containing pericellular matrix (PCM) controls both the biophysical and biochemical microenvironment of osteocytes, which are the most abundant cells embedded and dispersed in bones. As a molecular sieve, osteocytic PCMs not only regulate mass transport to and from osteocytes but also act as sensors of external mechanical environments. The turnover of osteocytic PCM remains largely unknown due to technical challenges. Here, we report a novel imaging technique based on metabolic labeling and "click-chemistry," which labels de novo PCM as "halos" surrounding osteocytes in vitro and in vivo. We then tested the method and showed different labeling patterns in young vs. old bones. Further "pulse-chase" experiments revealed dramatic difference in the "half-life" of PCM of cultured osteocytes (~70 h) and that of osteocytes in vivo (~75 d). When mice were subjected to either 3-week hindlimb unloading or 7-week tibial loading (5.1 N, 4 Hz, 3 d/week), PCM half-life was shortened (~20 d) and degradation accelerated. Matrix metallopeptidase MMP-14 was elevated in mechanically loaded osteocytes, which may contribute to PCM degradation. This study provides a detailed procedure that enables semi-quantitative study of the osteocytic PCM remodeling in vivo and in vitro. [ABSTRACT FROM AUTHOR]
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- 2022
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42. IMORTALIDADE SIMBÓLICA E ANSIEDADE PERANTE A MORTE: ESTUDO COMPARATIVO COM ESQUIZOFRÉNICOS.
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Durães, José Miguel
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IMMORTALITY of the soul ,PSYCHIATRIC research ,SCHIZOPHRENIA ,PSYCHOLOGICAL stress ,DEATH ,ANXIETY ,INSTITUTIONALIZED persons ,HEALTH - Abstract
Copyright of Cons-ciências is the property of Edicoes Universidade Fernando Pessoa and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2007
43. Regulatory SNPs: Altered Transcription Factor Binding Sites Implicated in Complex Traits and Diseases.
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Degtyareva, Arina O., Antontseva, Elena V., and Merkulova, Tatiana I.
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BINDING sites ,TRANSCRIPTION factors ,GENETIC variation ,GENOME-wide association studies ,PHENOTYPES - Abstract
The vast majority of the genetic variants (mainly SNPs) associated with various human traits and diseases map to a noncoding part of the genome and are enriched in its regulatory compartment, suggesting that many causal variants may affect gene expression. The leading mechanism of action of these SNPs consists in the alterations in the transcription factor binding via creation or disruption of transcription factor binding sites (TFBSs) or some change in the affinity of these regulatory proteins to their cognate sites. In this review, we first focus on the history of the discovery of regulatory SNPs (rSNPs) and systematized description of the existing methodical approaches to their study. Then, we brief the recent comprehensive examples of rSNPs studied from the discovery of the changes in the TFBS sequence as a result of a nucleotide substitution to identification of its effect on the target gene expression and, eventually, to phenotype. We also describe state-of-the-art genome-wide approaches to identification of regulatory variants, including both making molecular sense of genome-wide association studies (GWAS) and the alternative approaches the primary goal of which is to determine the functionality of genetic variants. Among these approaches, special attention is paid to expression quantitative trait loci (eQTLs) analysis and the search for allele-specific events in RNA-seq (ASE events) as well as in ChIP-seq, DNase-seq, and ATAC-seq (ASB events) data. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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44. A Circulating Exosome RNA Signature Is a Potential Diagnostic Marker for Pancreatic Cancer, a Systematic Study.
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Wu, Yixing, Zeng, Hongmei, Yu, Qing, Huang, Huatian, Fervers, Beatrice, Chen, Zhe-Sheng, and Lu, Lingeng
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PANCREATIC tumors ,EXOSOMES ,GENETIC mutation ,RNA ,EARLY detection of cancer ,TUMOR markers ,EXTRACELLULAR space ,PANCREATITIS ,NUCLEIC acids ,ACUTE diseases - Abstract
Simple Summary: Most patients with pancreatic cancer are diagnosed at an advanced stage due to the lack of tools with high sensitivity and specificity for early detection. Aberrant gene expression occurs in pancreatic cancer, which can be packaged into nanoparticles (also known as exosomes or nano-sized extracellular vesicles) and then released into blood. In this study, we aimed to evaluate the diagnostic value of a circulating exosome RNA signature in pancreatic cancer. Our findings indicate that the circulating exosome RNA signature is a potential marker for the early detection or diagnosis of pancreatic cancer. Several exosome proteins, miRNAs and KRAS mutations have been investigated in the hope of carrying out the early detection of pancreatic cancer with high sensitivity and specificity, but they have proven to be insufficient. Exosome RNAs, however, have not been extensively evaluated in the diagnosis of pancreatic cancer. The purpose of this study was to investigate the potential of circulating exosome RNAs in pancreatic cancer detection. By retrieving RNA-seq data from publicly accessed databases, differential expression and random-effects meta-analyses were performed. The results showed that pancreatic cancer had a distinct circulating exosome RNA signature in healthy individuals, and that the top 10 candidate exosome RNAs could distinguish patients from healthy individuals with an area under the curve (AUC) of 1.0. Three (HIST2H2AA3, LUZP6 and HLA-DRA) of the 10 genes in exosomes had similar differential patterns to those in tumor tissues based on RNA-seq data. In the validation dataset, the levels of these three genes in exosomes displayed good performance in distinguishing cancer from both chronic pancreatitis (AUC = 0.815) and healthy controls (AUC = 0.8558), whereas a slight difference existed between chronic pancreatitis and healthy controls (AUC = 0.586). Of the three genes, the level of HIST2H2AA3 was positively associated with KRAS status. However, there was no significant difference in the levels of the three genes across the disease stages (stages I–IV). These findings indicate that circulating exosome RNAs have a potential early detection value in pancreatic cancer, and that a distinct exosome RNA signature exists in distinguishing pancreatic cancer from healthy individuals. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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45. Hydrolysis of Extracellular ATP by Vascular Smooth Muscle Cells Transdifferentiated into Chondrocytes Generates P i but Not PP i.
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Buchet, Rene, Tribes, Camille, Rouaix, Valentine, Doumèche, Bastien, Fiore, Michele, Wu, Yuqing, Magne, David, Mebarek, Saida, Koyama, Hidenori, Carrasco-Pozo, Catalina, and Jung, Christian
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VASCULAR smooth muscle ,ADENOSINE triphosphate ,MUSCLE cells ,ADENOSINE monophosphate ,CARTILAGE cells ,HYDROLYSIS ,ADENOSINE diphosphate - Abstract
(1) Background: Tissue non-specific alkaline phosphatase (TNAP) is suspected to induce atherosclerosis plaque calcification. TNAP, during physiological mineralization, hydrolyzes the mineralization inhibitor inorganic pyrophosphate (PP
i ). Since atherosclerosis plaques are characterized by the presence of necrotic cells that probably release supraphysiological concentrations of ATP, we explored whether this extracellular adenosine triphosphate (ATP) is hydrolyzed into the mineralization inhibitor PPi or the mineralization stimulator inorganic phosphate (Pi ), and whether TNAP is involved. (2) Methods: Murine aortic smooth muscle cell line (MOVAS cells) were transdifferentiated into chondrocyte-like cells in calcifying medium, containing ascorbic acid and β-glycerophosphate. ATP hydrolysis rates were determined in extracellular medium extracted from MOVAS cultures during their transdifferentiation, using31 P-NMR and IR spectroscopy. (3) Results: ATP and PPi hydrolysis by MOVAS cells increased during transdifferentiation. ATP hydrolysis was sequential, yielding adenosine diphosphate (ADP), adenosine monophosphate (AMP), and adenosine without any detectable PPi . The addition of levamisole partially inhibited ATP hydrolysis, indicating that TNAP and other types of ectonucleoside triphoshatediphosphohydrolases contributed to ATP hydrolysis. (4) Conclusions: Our findings suggest that high ATP levels released by cells in proximity to vascular smooth muscle cells (VSMCs) in atherosclerosis plaques generate Pi and not PPi , which may exacerbate plaque calcification. [ABSTRACT FROM AUTHOR]- Published
- 2021
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- View/download PDF
46. Breast Cancer: A Molecularly Heterogenous Disease Needing Subtype-Specific Treatments.
- Author
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Testa, Ugo, Castelli, Germana, and Pelosi, Elvira
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BREAST cancer ,EPIDERMAL growth factor receptors ,TRIPLE-negative breast cancer ,METASTATIC breast cancer ,GENETIC mutation ,PROGESTERONE receptors - Abstract
Breast cancer is the most commonly occurring cancer in women. There were over two-million new cases in world in 2018. It is the second leading cause of death from cancer in western countries. At the molecular level, breast cancer is a heterogeneous disease, which is characterized by high genomic instability evidenced by somatic gene mutations, copy number alterations, and chromosome structural rearrangements. The genomic instability is caused by defects in DNA damage repair, transcription, DNA replication, telomere maintenance and mitotic chromosome segregation. According to molecular features, breast cancers are subdivided in subtypes, according to activation of hormone receptors (estrogen receptor and progesterone receptor), of human epidermal growth factors receptor 2 (HER2), and or BRCA mutations. In-depth analyses of the molecular features of primary and metastatic breast cancer have shown the great heterogeneity of genetic alterations and their clonal evolution during disease development. These studies have contributed to identify a repertoire of numerous disease-causing genes that are altered through different mutational processes. While early-stage breast cancer is a curable disease in about 70% of patients, advanced breast cancer is largely incurable. However, molecular studies have contributed to develop new therapeutic approaches targeting HER2, CDK4/6, PI3K, or involving poly(ADP-ribose) polymerase inhibitors for BRCA mutation carriers and immunotherapy. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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47. ENPP1, an Old Enzyme with New Functions, and Small Molecule Inhibitors—A STING in the Tale of ENPP1.
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Onyedibe, Kenneth I., Wang, Modi, Sintim, Herman O., Yatsunyk, Liliya, and Monchaud, David
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SMALL molecules ,ENZYMES ,DISEASE progression ,INORGANIC pyrophosphatase ,INTERFERONS - Abstract
Ectonucleotide pyrophosphatase/phosphodiesterase I (ENPP1) was identified several decades ago as a type II transmembrane glycoprotein with nucleotide pyrophosphatase and phosphodiesterase enzymatic activities, critical for purinergic signaling. Recently, ENPP1 has emerged as a critical phosphodiesterase that degrades the stimulator of interferon genes (STING) ligand, cyclic GMP–AMP (cGAMP). cGAMP or analogs thereof have emerged as potent immunostimulatory agents, which have potential applications in immunotherapy. This emerging role of ENPP1 has placed this "old" enzyme at the frontier of immunotherapy. This review highlights the roles played by ENPP1, the mechanism of cGAMP hydrolysis by ENPP1, and small molecule inhibitors of ENPP1 with potential applications in diverse disease states, including cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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48. RNA fine-tunes estrogen receptor-alpha binding on low-affinity DNA motifs for transcriptional regulation
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Soota, Deepanshu, Saravanan, Bharath, Mann, Rajat, Kharbanda, Tripti, and Notani, Dimple
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- 2024
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49. Cancer Stem Cells and Signaling Pathways
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Surajit Pathak, Antara Banerjee, Surajit Pathak, and Antara Banerjee
- Abstract
Cancer Stem Cells and Signaling Pathways explores the mechanism of cancer stem cell signaling pathways in cancer advancement, serving as an ideal reference guide for investigators with valuable answers to problems associated with anti-cancer treatments and an understanding of the crosstalk among the signaling pathways in CSC regulation. Despite recent advances in tumor therapy and a greater understanding of their biology, tumors continue to be a prevalent and fatal worldwide. According to a novel paradigm in tumor biology, a small percentage of the cells within a tumor known as cancer stem cells (CSCs) are predicted as a crucial population for tumor progression. - Presents cancer stem characteristics and their signaling pathways - Highlights the use of animal models for cancer research, the use of genetically modified stem cells to deliver antitumor agents, and the significance of stem cell signaling in drug discovery - Covers basic and translational research appropriate for scientists and clinicians exploring alternative treatments for various cancers
- Published
- 2023
50. Clinical Innovation in Rheumatology : Past, Present, and Future
- Author
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Jason Liebowitz, Philip Seo, Jason Liebowitz, and Philip Seo
- Abstract
Tremendous advances have been made in the field of rheumatology, profoundly changing our understanding of many rheumatologic conditions and creating a new frontier for effective treatments. This book explains the most significant advances in research and care and speculates as to what will be the future of rheumatology over the next several decades, including challenges and lessons learned from past experiences in the field. It highlights landmark research articles and scientific discoveries, discusses how big data, personalized medicine, new biomarkers for disease, and other technological revolutions will shape the future, making it a must-have resource for physicians from all regions of the world. Key Features• Includes concise yet thorough description of the landmark studies and scientific breakthroughs coupled with easy-to-follow organizational structure of chapters that are accessible to readers at different levels of training.• Brings together world-leading experts to provide a fresh perspective to trainees such as residents and fellows-in-training, as well as more senior clinicians and researchers across the field of rheumatology and in specialties such as cardiology, dermatology, pulmonology, nephrology, and neurology, all of whom care for patients with rheumatologic conditions.• Allows the authors to imagine and speculate about the evolution of the field of rheumatology in the coming decades. Examples of such speculative possibilities include use of synovial biopsy to predict response to treatment in rheumatoid arthritis, replacement of renal biopsy with urinary proteomics in diagnosing and classifying lupus nephritis, use of new therapeutics to obviate the need for steroids in the treatment of ANCA-associated vasculitis, and the use of machine learning to evaluate subtle changes in imaging for management of inflammatory arthritis.
- Published
- 2022
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