8 results on '"Bonora GL"'
Search Results
2. Genomic Analysis of 18th-Century Kazakh Individuals and Their Oral Microbiome.
- Author
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White AE, de-Dios T, Carrión P, Bonora GL, Llovera L, Cilli E, Lizano E, Khabdulina MK, Tleugabulov DT, Olalde I, Marquès-Bonet T, Balloux F, Pettener D, van Dorp L, Luiselli D, and Lalueza-Fox C
- Abstract
The Asian Central Steppe, consisting of current-day Kazakhstan and Russia, has acted as a highway for major migrations throughout history. Therefore, describing the genetic composition of past populations in Central Asia holds value to understanding human mobility in this pivotal region. In this study, we analyse paleogenomic data generated from five humans from Kuygenzhar, Kazakhstan. These individuals date to the early to mid-18th century, shortly after the Kazakh Khanate was founded, a union of nomadic tribes of Mongol Golden Horde and Turkic origins. Genomic analysis identifies that these individuals are admixed with varying proportions of East Asian ancestry, indicating a recent admixture event from East Asia. The high amounts of DNA from the anaerobic Gram-negative bacteria Tannerella forsythia , a periodontal pathogen, recovered from their teeth suggest they may have suffered from periodontitis disease. Genomic analysis of this bacterium identified recently evolved virulence and glycosylation genes including the presence of antibiotic resistance genes predating the antibiotic era. This study provides an integrated analysis of individuals with a diet mostly based on meat (mainly horse and lamb), milk, and dairy products and their oral microbiome.
- Published
- 2021
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3. The formation of human populations in South and Central Asia.
- Author
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Narasimhan VM, Patterson N, Moorjani P, Rohland N, Bernardos R, Mallick S, Lazaridis I, Nakatsuka N, Olalde I, Lipson M, Kim AM, Olivieri LM, Coppa A, Vidale M, Mallory J, Moiseyev V, Kitov E, Monge J, Adamski N, Alex N, Broomandkhoshbacht N, Candilio F, Callan K, Cheronet O, Culleton BJ, Ferry M, Fernandes D, Freilich S, Gamarra B, Gaudio D, Hajdinjak M, Harney É, Harper TK, Keating D, Lawson AM, Mah M, Mandl K, Michel M, Novak M, Oppenheimer J, Rai N, Sirak K, Slon V, Stewardson K, Zalzala F, Zhang Z, Akhatov G, Bagashev AN, Bagnera A, Baitanayev B, Bendezu-Sarmiento J, Bissembaev AA, Bonora GL, Chargynov TT, Chikisheva T, Dashkovskiy PK, Derevianko A, Dobeš M, Douka K, Dubova N, Duisengali MN, Enshin D, Epimakhov A, Fribus AV, Fuller D, Goryachev A, Gromov A, Grushin SP, Hanks B, Judd M, Kazizov E, Khokhlov A, Krygin AP, Kupriyanova E, Kuznetsov P, Luiselli D, Maksudov F, Mamedov AM, Mamirov TB, Meiklejohn C, Merrett DC, Micheli R, Mochalov O, Mustafokulov S, Nayak A, Pettener D, Potts R, Razhev D, Rykun M, Sarno S, Savenkova TM, Sikhymbaeva K, Slepchenko SM, Soltobaev OA, Stepanova N, Svyatko S, Tabaldiev K, Teschler-Nicola M, Tishkin AA, Tkachev VV, Vasilyev S, Velemínský P, Voyakin D, Yermolayeva A, Zahir M, Zubkov VS, Zubova A, Shinde VS, Lalueza-Fox C, Meyer M, Anthony D, Boivin N, Thangaraj K, Kennett DJ, Frachetti M, Pinhasi R, and Reich D
- Subjects
- Asia, Central, Asia, Southeastern, Gene Flow, History, Ancient, Humans, Iran, Sequence Analysis, DNA, Asian People genetics, Farms history, Human Migration history, Population genetics
- Abstract
By sequencing 523 ancient humans, we show that the primary source of ancestry in modern South Asians is a prehistoric genetic gradient between people related to early hunter-gatherers of Iran and Southeast Asia. After the Indus Valley Civilization's decline, its people mixed with individuals in the southeast to form one of the two main ancestral populations of South Asia, whose direct descendants live in southern India. Simultaneously, they mixed with descendants of Steppe pastoralists who, starting around 4000 years ago, spread via Central Asia to form the other main ancestral population. The Steppe ancestry in South Asia has the same profile as that in Bronze Age Eastern Europe, tracking a movement of people that affected both regions and that likely spread the distinctive features shared between Indo-Iranian and Balto-Slavic languages., (Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
- Published
- 2019
- Full Text
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4. Qaleh Kurd Cave (Qazvin, Iran): Oldest Evidence of Middle Pleistocene Hominin Occupations and a Human Deciduous Tooth in the Iranian Central Plateau.
- Author
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Vahdati Nasab, Hamed, Berillon, Gilles, Hashemi, Seyyed Milad, Bahain, Jean-Jacques, Sévêque, Noémie, Jayez, Mozhgan, Bonilauri, Stéphanie, Jamet, Guillaume, Kharazian, Mohammad Akhavan, Nateghi, Asghar, Abdollahi, Alieh, Antoine, Pierre, Beheshti, Iraj, Boulbes, Nicolas, Chapon-Sao, Cécile, Gallet, Xavier, Falguères, Christophe, Garbé, Lisa, Kazzazi, Mandan, and Mousavi, Ahmad Zavar
- Published
- 2024
- Full Text
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5. Ancient genome of Empress Ashina reveals the Northeast Asian origin of Göktürk Khanate.
- Author
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Yang, Xiao‐Min, Meng, Hai‐Liang, Zhang, Jian‐Lin, Yu, Yao, Allen, Edward, Xia, Zi‐Yang, Zhu, Kong‐Yang, Du, Pan‐Xin, Ren, Xiao‐Ying, Xiong, Jian‐Xue, Lu, Xiao‐Yu, Ding, Yi, Han, Sheng, Liu, Wei‐Peng, Jin, Li, Wang, Chuan‐Chao, and Wen, Shao‐Qing
- Subjects
FOSSIL DNA ,ANCIENT history ,GENETIC variation - Abstract
This article presents the results of a genetic analysis of the Ashina, a nomadic Turkic-speaking group from ancient Eurasia. The study used data from ancient DNA samples to investigate the genetic ancestry of the Ashina and their relationships with other Eurasian populations. The results showed that the Ashina had a mixed genetic heritage, with influences from both West Eurasian and East Eurasian populations. The study also found genetic differences between the Ashina and other Turkic-speaking populations, suggesting genetic heterogeneity within the Turkic Khaganate. Additionally, the analysis revealed genetic relationships between the Ashina and other ancient Eurasian populations, such as the Xiongnu and Tianshan nomadic groups. The findings provide insights into the genetic history and diversity of ancient Eurasian populations. [Extracted from the article]
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- 2023
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6. Extensive ethnolinguistic diversity at the crossroads of North China and South Siberia reflects multiple sources of genetic diversity.
- Author
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He, Guang‐Lin, Wang, Meng‐Ge, Zou, Xing, Yeh, Hui‐Yuan, Liu, Chang‐Hui, Liu, Chao, Chen, Gang, and Wang, Chuan‐Chao
- Subjects
GENETIC variation ,SINGLE nucleotide polymorphisms ,POPULATION genetics ,NATURAL selection ,EAST Asians ,NATURAL history - Abstract
North China and South Siberia, populated by Altaic‐ and Sino‐Tibetan‐speaking populations, possess extensive ethnolinguistic diversity and serve as the crossroads for the initial peopling of America and western–eastern transcontinental communication. However, the population genetic structure and admixture history of northern East Asians remain poorly understood due to a lack of genome‐wide data, especially for Mongolic‐speaking people in China. We genotyped genome‐wide single nucleotide polymorphisms for 510 individuals from 38 Mongolic, Tungusic, and Sinitic‐speaking populations. We first explored the shared alleles and haplotypes within the studied groups. We then merged with 3508 published modern and ancient Eurasian individuals to reconstruct the deep evolutionary and natural selection history of northern East Asians. We identified genetic substructures within Altaic‐speaking populations: Western Turkic people harbored more western Eurasian‐related ancestry; Northern Mongolic people in Siberia and eastern Tungusic people in Amur River Basin (ARB) possessed a majority of Neolithic ARB related ancestry; Southern Mongolic people in China possessed apparent genetic influence from Neolithic Yellow River Basin (YRB) farmers. Additionally, we found the differentiated admixture history between western and eastern Mongolians and geographically close Northeast Hans: the former received a genetic impact from western Eurasians, and the latter retained the primary Neolithic YRB and ARB ancestry. Moreover, we demonstrated that Kalmyk people from the northern Caucasus Mountains possessed a strong genetic affinity with Neolithic Mongolian Plateau (MP) people, supporting the hypothesis of their eastern Eurasian origin and long‐distance migration history. We also illuminated that historical pastoral empires in the MP contributed considerably to the gene pool of northern Mongolic people but rarely to the southern ones. We finally found natural selection signatures in Mongolians associated with alcohol metabolism. Our results demonstrated that the Neolithic ancestral sources from the MP or ARB played an important role in spreading Altaic populations and languages. The observed multisources of genetic diversity contributed significantly to the extensive ethnolinguistic diversity in northern East Asia. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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7. Y-DNA genetic evidence reveals several different ancient origins in the Brahmin population.
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Mahal, David G.
- Subjects
NONCITIZENS ,ETHNIC groups ,AFFINITY groups ,ANALYSIS of variance ,EVIDENCE - Abstract
The ancient geographical origins of Brahmins—a prominent ethnic group in the Indian subcontinent—have remained controversial for a long time. This study employed the AMOVA (analysis of molecular variance) test to evaluate genetic affinities of this group with thirty populations of Central Asia and Europe. A domestic comparison was performed with fifty non-Brahmin groups in India. The results showed that Brahmins had genetic affinities with several foreign populations and also shared their genetic heritage with several domestic non-Brahmin groups. The study identified the deep ancient origins of Brahmins by tracing their Y-chromosome haplogroups and genetic markers on the Y-DNA phylogenetic tree. It was confirmed that the progenitors of this group emerged from at least 12 different geographic regions of the world. The study concluded that about 83% of the Brahmins in the dataset belonged to four major haplogroups, of which two emerged from Central Asia, one from the Fertile Crescent, and one was of an indigenous Indian origin. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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8. New insights into the fine-scale history of western-eastern admixture of the northwestern Chinese population in the Hexi Corridor via genome-wide genetic legacy.
- Author
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Yao H, Wang M, Zou X, Li Y, Yang X, Li A, Yeh HY, Wang P, Wang Z, Bai J, Guo J, Chen J, Ding X, Zhang Y, Lin B, Wang CC, and He G
- Subjects
- China, Chromosomes, Human, Y genetics, DNA, Ancient, DNA, Mitochondrial genetics, Ethnicity genetics, Genetics, Population methods, Genome-Wide Association Study methods, Human Migration, Humans, Phylogeny, Polymorphism, Single Nucleotide genetics, Asian People genetics, Genome genetics
- Abstract
Trans-Eurasian cultural and genetic exchanges have significantly influenced the demographic dynamics of Eurasian populations. The Hexi Corridor, located along the southeastern edge of the Eurasian steppe, served as an important passage of the ancient Silk Road in Northwest China and intensified the transcontinental exchange and interaction between populations on the Central Plain and in Western Eurasia. Historical and archeological records indicate that the Western Eurasian cultural elements were largely brought into North China via this geographical corridor, but there is debate on the extent to which the spread of barley/wheat agriculture into North China and subsequent Bronze Age cultural and technological mixture/shifts were achieved by the movement of people or dissemination of ideas. Here, we presented higher-resolution genome-wide autosomal and uniparental Y/mtDNA SNP or STR data for 599 northwestern Han Chinese individuals and conducted 2 different comprehensive genetic studies among Neolithic-to-present-day Eurasians. Genetic studies based on lower-resolution STR markers via PCA, STRUCTURE, and phylogenetic trees showed that northwestern Han Chinese individuals had increased genetic homogeneity relative to northern Mongolic/Turkic/Tungusic speakers and Tibeto-Burman groups. The genomic signature constructed based on modern/ancient DNA further illustrated that the primary ancestry of the northwestern Han was derived from northern millet farmer ancestors, which was consistent with the hypothesis of Han origin in North China and more recent northwestward population expansion. This was subsequently confirmed via excess shared derived alleles in f
3 /f4 statistical analyses and by more northern East Asian-related ancestry in the qpAdm/qpGraph models. Interestingly, we identified one western Eurasian admixture signature that was present in northwestern Han but absent from southern Han, with an admixture time dated to approximately 1000 CE (Tang and Song dynasties). Generally, we provided supporting evidence that historic Trans-Eurasian communication was primarily maintained through population movement, not simply cultural diffusion. The observed population dynamics in northwestern Han Chinese not only support the North China origin hypothesis but also reflect the multiple sources of the genetic diversity observed in this population.- Published
- 2021
- Full Text
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