62 results on '"Benjamin Dubansky"'
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2. Development and Environment. Edited by Warren Burggren and Benjamin Dubansky. Cham (Switzerland) and New York: Springer. $179.99. xiv + 467 p.; ill.; index. ISBN: 978-3-319-75933-3 (hc); 978-3-319-75935-7 (eb). 2018
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Emilie C. Snell-Rood
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Index (economics) ,media_common.quotation_subject ,Art ,General Agricultural and Biological Sciences ,Humanities ,media_common - Published
- 2019
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3. Experimental Assessment of Cardiovascular Physiology in the Chick Embryo
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Vijayakumar Sukumaran, Onur Mutlu, Mohammad Murtaza, Rawia Alhalbouni, Benjamin Dubansky, and Huseyin C Yalcin
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Developmental Biology - Published
- 2023
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4. Acid-base and hematological regulation in chicken embryos during internal progressive hypercapnic hypoxia
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Warren W. Burggren, Sarah J. Andrewartha, Casey A. Mueller, Benjamin Dubansky, and Hiroshi Tazawa
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Pulmonary and Respiratory Medicine ,Acid-Base Equilibrium ,Physiology ,General Neuroscience ,Alkalosis ,Chick Embryo ,Hematology ,Hypercapnia ,Hematocrit ,Animals ,Acidosis, Respiratory ,Hypoxia ,Acidosis ,Chickens - Abstract
Development of the capacity to mitigate potential disturbances to blood physiology in bird embryos is incompletely understood. We investigated regulation of acid-base and hematology in day 15 chicken embryos exposed to graded intrinsic hypercapnic hypoxia created by varying degrees of water submersion. Metabolic acidosis with additional respiratory or metabolic acidosis occurred at 2 h according to magnitude of submersion. Acid-base disturbance was partially compensated by metabolic alkalosis at 6 h, but compensatory metabolic alkalosis was absent at 24 h. Following submersion with only air cell exposed to air, both hypercapnic respiratory acidosis and metabolic acidosis occurred within 10 min. Subsequently, both forms of acidosis created lethal levels of [HCO
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- 2022
5. Embryotoxicity and Physiological Compensation in Chicken Embryos Exposed to Crude Oil
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Lara do Amaral-Silva, Hiroshi Tazawa, Benjamin Dubansky, Maria Carolina Rojas-Antich, Warren W. Burggren, University of North Texas, and Universidade Estadual Paulista (UNESP)
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Physiological regulation ,Health, Toxicology and Mutagenesis ,Bicarbonate ,Blood variables ,Chick Embryo ,Hematocrit ,chemistry.chemical_compound ,Animal science ,Edema ,medicine ,Animals ,Environmental Chemistry ,Petroleum Pollution ,medicine.diagnostic_test ,Chemistry ,Stressors ,Oil spills ,Metabolic acidosis ,Embryo ,Crude oil ,medicine.disease ,Red blood cell ,Petroleum ,medicine.anatomical_structure ,Toxic effects ,Embryotoxicity ,Hemoglobin ,medicine.symptom ,Chickens ,Avian toxicity - Abstract
Made available in DSpace on 2022-04-29T08:30:21Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-08-01 Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Terrestrial, marine, or aquatic oil spills can directly or indirectly contaminate bird eggs. We hypothesized that chicken embryos exposed to crude oil can physiologically compensate to mitigate the potentially toxic effect of lower doses of oil. Embryos exposed to 0, 1, 3, or 5 µL of oil on embryonic days 4 and 10 were initially analyzed for mortality. All oil doses decreased day 4 embryo survival, but only the 2 highest oil doses lowered survival when applied on day 10. Thus, day 15 embryos treated with 1, 3, and 5 µL of source oil on day 10 had arterialized blood analyzed. The hematological variables hematocrit, red blood cell concentration ([RBC]), and hemoglobin concentration increased in response to 1 µL, were unchanged by 3 µL, and decreased by 5 µL of oil treatment. No changes occurred in arterialized blood gas variables (partial pressure of O2 [PO2], pH, bicarbonate concentration) for 1 and 3 µL embryos, but 5 µL of oil decreased PO2 and caused metabolic acidosis. Increased blood lactate in embryos treated with 3 and 5 µL of oil was correlated with decreased hematocrit and [RBC] and increased body mass, the latter likely reflecting edema. We conclude that embryos in middle development physiologically compensated for negative effects of lower doses of crude oil but that higher doses of oil were harmful to the embryos at all developmental stages. Environ Toxicol Chem 2021;40:2347–2358. © 2021 SETAC. Developmental Integrative Biology Department of Biological Sciences University of North Texas Integrative Thermal Physiology Department of Animal Morphology and Physiology São Paulo State University Jaboticabal Integrative Thermal Physiology Department of Animal Morphology and Physiology São Paulo State University Jaboticabal FAPESP: 2017/21581-2
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- 2021
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6. Assessing Pressure–Volume Relationship in Developing Heart of Zebrafish In-Vivo
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Cameron Villarreal, Cheng-Jen Chuong, Tanveer Teranikar, Nabid Salehin, Benjamin Dubansky, and Juhyun Lee
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Cardiac output ,Embryo, Nonmammalian ,animal structures ,0206 medical engineering ,ved/biology.organism_classification_rank.species ,Biomedical Engineering ,Pulsatile flow ,Hemodynamics ,02 engineering and technology ,Biology ,Animals, Genetically Modified ,medicine ,Animals ,Model organism ,Zebrafish ,ved/biology ,Heart ,Stroke volume ,Blood flow ,biology.organism_classification ,020601 biomedical engineering ,Cell biology ,medicine.anatomical_structure ,Ventricle - Abstract
During embryogenesis, the developing heart transforms from a linear peristaltic tube into a multi-chambered pulsatile pump with blood flow-regulating valves. In this work, we report how hemodynamic parameters evolve during the heart's development, leading to its rhythmic pumping and blood flow regulation as a functioning organ. We measured the time course of intra-ventricular pressure from zebrafish embryos at 3, 4, and 5 days post fertilization (dpf) using the servo null method. We also measured the ventricular volume and monitored the opening/closing activity of the AV and VB valves using 4D selective plane illumination microscopy (SPIM). Our results revealed significant increases in peak systolic pressure, stroke volume and work, cardiac output, and power generation, and a total peripheral resistance decrease from zebrafish at 4, 5 dpf versus 3 dpf. These data illustrate that the early-stage zebrafish heart's increasing efficiency is synchronous with the expected changes in valve development, chamber morphology and increasing vascular network complexity. Such physiological measurements in tractable laboratory model organisms are critical for understanding how gene variants may affect phenotype. As the zebrafish emerges as a leading biomedical model organism, the ability to effectively measure its physiology is critical to its translational relevance.
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- 2021
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7. Is Exposure to Macondo Oil Reflected in the Otolith Chemistry of Marsh-Resident Fish?
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Paola C López-Duarte, F Joel Fodrie, Olaf P Jensen, Andrew Whitehead, Fernando Galvez, Benjamin Dubansky, and Kenneth W Able
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Medicine ,Science - Abstract
Genomic and physiological responses in Gulf killifish (Fundulus grandis) in the northern Gulf of Mexico have confirmed oil exposure of resident marsh fish following the Macondo blowout in 2010. Using these same fish, we evaluated otolith microchemistry as a method for assessing oil exposure history. Laser-ablation inductively-coupled-plasma mass spectrometry was used to analyze the chemical composition of sagittal otoliths to assess whether a trace metal signature could be detected in the otoliths of F. grandis collected from a Macondo-oil impacted site in 2010, post-spill relative to pre-spill, as well as versus fish from areas not impacted by the spill. We found no evidence of increased concentrations of two elements associated with oil contamination (nickel and vanadium) in F. grandis otoliths regardless of Macondo oil exposure history. One potential explanation for this is that Macondo oil is relatively depleted of those metals compared to other crude oils globally. During and after the spill, however, elevated levels of barium, lead, and to a lesser degree, copper were detected in killifish otoliths at the oil-impacted collection site in coastal Louisiana. This may reflect oil contact or other environmental perturbations that occurred concomitant with oiling. For example, increases in barium in otoliths from oil-exposed fish followed (temporally) freshwater diversions in Louisiana in 2010. This implicates (but does not conclusively demonstrate) freshwater diversions from the Mississippi River (with previously recorded higher concentrations of lead and copper), designed to halt the ingress of oil, as a mechanism for elevated elemental uptake in otoliths of Louisiana marsh fishes. These results highlight the potentially complex and indirect effects of the Macondo oil spill and human responses to it on Gulf of Mexico ecosystems, and emphasize the need to consider the multiple stressors acting simultaneously on inshore fish communities.
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- 2016
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8. Use of Polyvinyl Alcohol-Porcine Small Intestine Submucosa Stent in the Prevention of Anastomotic Leaks in the Porcine Colon
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Henry Huson, Traci Goodchild, Lu Sun, Amy Scarborough, Tyler Novak, Benjamin Dubansky, John Morrison, and Ian Hodgdon
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Colon ,Swine ,Polyvinyl Alcohol ,Anastomosis, Surgical ,Intestine, Small ,Animals ,Surgery ,Anastomotic Leak ,Stents - Abstract
Gastrointestinal anastomoses are performed millions of times per year worldwide. The major complication they share is anastomotic leak. We describe the development and initial safety/efficacy of a novel luminal stent which aims to address this clinical issue.The stent was created out of two materials, a polyvinyl alcohol core and outer layer of acellular porcine small intestine submucosa. Ten healthy pigs underwent laparotomy, a portion of the colon was transected, and the stent was placed within the colonic lumen at the site of resection. Pigs were sacrificed at the end of postoperative week 2, and postoperative week 4. A portion of the descending colon was resected, and tissue samples from the anastomosis, intentional defect scar, and normal bowel overlying the stent were sent for histopathologic examination.All ten animals survived the study. None developed any clinical signs of obstruction, infection, leakage, fistula, wound complications, or bleeding. No evidence of colonic leak or luminal stenosis/stricture was noted.The results of this study show that a polyvinyl alcohol/acellular porcine small intestine submucosa stent sewn underneath a colonic anastomosis with a 2 cm intentional defect will result in no anastomotic complications. There were also no complications from placing this stent in any pigs. Additional studies with a control group should be conducted to see if this same stent can be built in different diameters, lengths, and configurations to prevent leaks in other organs. These encouraging results will hopefully lead to decreased leaks and the need for temporary ostomies in humans.
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- 2021
9. Arterial wall thickening normalizes arterial wall tension with growth in American alligators, Alligator mississippiensis
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Ruth M. Elsey, Tobias Wang, Benjamin Dubansky, Brooke H. Dubansky, Cleo A. C. Leite, Dane A. Crossley, and Renato Filogonio
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030110 physiology ,0106 biological sciences ,0301 basic medicine ,Aortic arch ,medicine.medical_specialty ,Physiology ,Alligator ,Law of Laplace ,010603 evolutionary biology ,01 natural sciences ,Biochemistry ,Scaling ,Arterial wall stress ,03 medical and health sciences ,Endocrinology ,Internal medicine ,biology.animal ,medicine.artery ,Heart rate ,medicine ,Arterial wall ,Crocodilians ,Ecology, Evolution, Behavior and Systematics ,biology ,Tension (physics) ,Chemistry ,Left pulmonary artery ,Blood pressure ,Cardiology ,Animal Science and Zoology ,Thickening - Abstract
Arterial wall tension increases with luminal radius and arterial pressure. Hence, as body mass (Mb) increases, associated increases in radius induces larger tension. Thus, it could be predicted that high tension would increase the potential for rupture of the arterial wall. Studies on mammals have focused on systemic arteries and have shown that arterial wall thickness increases with Mb and normalizes tension. Reptiles are good models to study scaling because some species exhibit large body size range associated with growth, thus, allowing for ontogenetic comparisons. We used post hatch American alligators, Alligator mississippiensis, ranging from 0.12 to 6.80 kg (~ 60-fold) to investigate how both the right aortic arch (RAo) and the left pulmonary artery (LPA) change with Mb. We tested two possibilities: (i) wall thickness increases with Mb and normalizes wall tension, such that stress (stress = tension/thickness) remains unchanged; (ii) collagen content scales with Mb and increases arterial strength. We measured heart rate and systolic and mean pressures from both systemic and pulmonary circulations in anesthetized animals. Once stabilized alligators were injected with adrenaline to induce a physiologically relevant increase in pressure. Heart rate decreased and systemic pressures increased with Mb; pulmonary pressures remained unchanged. Both the RAo and LPA were fixed under physiological hydrostatic pressures and displayed larger radius, wall tension and thickness as Mb increased, thus, stress was independent from Mb; relative collagen content was unchanged. We conclude that increased wall thickness normalizes tension and reduces the chances of arterial walls rupturing in large alligators.
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- 2021
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10. Prenatal hypoxia affects scaling of blood pressure and arterial wall mechanics in the common snapping turtle, Chelydra serpentina
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Dane A. Crossley, Benjamin Dubansky, Brooke H. Dubansky, Renato Filogonio, and Cleo A. C. Leite
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medicine.medical_specialty ,Embryo, Nonmammalian ,Physiology ,Common snapping turtle ,Blood Pressure ,Biology ,Pulmonary Artery ,Biochemistry ,Body Mass Index ,food ,Heart Rate ,Internal medicine ,medicine ,Animals ,Arterial wall ,Hypoxia ,Molecular Biology ,Lung ,Left aortic arch ,Heart ,Left pulmonary artery ,Hypoxia (medical) ,biology.organism_classification ,food.food ,Turtles ,Oxygen ,medicine.anatomical_structure ,Blood pressure ,Ventricle ,Cardiology ,Female ,medicine.symptom ,Chelydra - Abstract
In reptiles, exposure to hypoxia during embryonic development affects several cardiovascular parameters. These modifications may impose different mechanical stress to the arterial system, and we speculated that the arterial wall of major outflow vessels would be modified accordingly. Since non-crocodilian reptiles possess a partially divided ventricle, ensuing similar systemic and pulmonary systolic pressures, we investigated how morphological and mechanical properties of segments from the left aortic arch (LAo) and the proximal and distal segments of the left pulmonary artery (LPAp and LPAd, respectively) change as body mass (Mb) increases. Eggs from common snapping turtles, Chelydra serpentina, were incubated under normoxia (21% O2; N21) or hypoxia (10% O2; H10), hatched and maintained in normoxia thereafter. Turtles (0.11–6.85 kg) were cannulated to measure arterial pressures, and an injection of adrenaline was used to increase pressures. Portions of the LAo, LPAp and LPAd were fixed under physiological hydrostatic pressures for histology and mechanical assessment. Arterial pressures increased with Mb for N21 but not for H10. Although mechanical and functional characteristics from the LPAp and LPAd were similar between N21 and H10, wall thickness from LAo did not change with Mb in the H10 group, thus wall stress increased in larger turtles. This indicates that larger H10 turtles probably experience an elevated probability of arterial wall rupture without concomitant changes in the cardiovascular system to prevent it. Finally, collagen content of the LPAp and LAo was smaller than in LPAd, suggesting a more distensible arterial wall could attenuate higher pressures from larger turtles.
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- 2021
11. Transcriptome profiling in conservation physiology and ecotoxicology: mechanistic insights into organism–environment interactions to both test and generate hypotheses
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Andrew Whitehead, Fernando Galvez, Charles A. Brown, Marisa L. Trego, Benjamin Dubansky, and Chelsea D. Hess
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Transcriptome profiling ,Ecotoxicology ,Computational biology ,Biology ,Organism - Abstract
A key challenge in conservation biology is to identify natural populations with compromised health and identify causative agents. However, wildlife are exposed to a complex matrix of natural and anthropogenic stressors such that identifying particular agents of distress is difficult. Yet, establishing cause and effect between human-induced environmental changes and adverse health is necessary to guide conservation planning. Transcriptome profiling, with thoughtful experimental design and appropriate metadata, is useful for establishing cause and effect between exposures to environmental stressors and adverse health outcomes. Here we describe transcriptome profiling and associated paradigms that are useful for wildlife health assessment and conservation planning, with particular emphasis on pollution. We emphasize that these tools are important for testing hypotheses about causative agents of distress, but also for generating new hypotheses about causes and consequences. We outline two case studies that highlight attributes of transcriptomics tools and approaches that add value for conservation practitioners.
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- 2020
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12. Underlying Ossification Phenotype in a Murine Model of Metastatic Synovial Sarcoma
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Matthew Kirkham, Austen Kalivas, Kevin B. Jones, Benjamin Dubansky, Brooke H. Dubansky, Sarah Luelling, Jared J. Barrott, and Kaniz Fatema
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Pathology ,Biopsy ,inflammation 5 ,Kaplan-Meier Estimate ,synovial sarcoma ,Metastasis ,lcsh:Chemistry ,Mice ,Medicine ,Neoplasm Metastasis ,lcsh:QH301-705.5 ,Spectroscopy ,bone development genes 4 ,Soft tissue ,General Medicine ,Prognosis ,Immunohistochemistry ,Phenotype ,Synovial sarcoma ,Computer Science Applications ,intralesional calcification 6 ,heterotopic ossification 3 ,Gene Fusion ,medicine.symptom ,parathyroid hormone-like hormone ,medicine.medical_specialty ,Genotype ,synovial sarcoma 1 ,bone development genes ,intralesional calcification ,Article ,Bone and Bones ,Catalysis ,Inorganic Chemistry ,Sarcoma, Synovial ,Biomarkers, Tumor ,Animals ,Humans ,metastasis ,Physical and Theoretical Chemistry ,Molecular Biology ,Metastatic Synovial Sarcoma ,business.industry ,Ossification ,Gene Expression Profiling ,Ossification, Heterotopic ,Organic Chemistry ,Cancer ,medicine.disease ,Disease Models, Animal ,heterotopic ossification ,lcsh:Biology (General) ,lcsh:QD1-999 ,inflammation ,metastasis 2 ,Heterotopic ossification ,business ,parathyroid hormone-like hormone 7 - Abstract
Synovial sarcoma, an uncommon cancer, typically affects young adults. Survival rates range from 36% to 76%, decreasing significantly when metastases are present. Synovial sarcomas form in soft tissues, often near bones, with about 10% demonstrating ossification in the tumor. The literature is inconclusive on whether the presence of ossification portends a worse prognosis. To this end, we analyzed our genetic mouse models of synovial sarcoma to determine the extent of ossification in the tumors and its relationship with morbidity. We noted higher ossification within our metastatic mouse model of synovial sarcoma. Not only did we observe ossification within the tumors at a frequency of 7%, but an even higher frequency, 72%, of bone reactivity was detected by radiography. An enrichment of bone development genes was associated with primary tumors, even in the absence of an ossification phenotype. In spite of the ossification being intricately linked with the metastatic model, the presence of ossification was not associated with a faster or worse morbidity in the mice. Our conclusion is that both metastasis and ossification are dependent on time, but that they are independent of one another.
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- 2020
13. Natural development of dermal ectopic bone in the american alligator (Alligator mississippiensis ) resembles heterotopic ossification disorders in humans
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Benjamin Dubansky and Brooke H. Dubansky
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0106 biological sciences ,0301 basic medicine ,Histology ,Alligator ,Soft tissue ,Anatomy ,Biology ,medicine.disease ,biology.organism_classification ,Progressive osseous heteroplasia ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,030104 developmental biology ,Fibrodysplasia ossificans progressiva ,biology.animal ,Intramembranous ossification ,medicine ,Osteoderm ,Heterotopic ossification ,American alligator ,Ecology, Evolution, Behavior and Systematics ,Biotechnology - Abstract
Heterotopic ossification (HO) occurs when soft tissues are inappropriately converted to bony tissue. Several human diseases result in HO with few reliable treatment options. Animal models that naturally produce dermal ectopic bone (i.e., osteoderms), such as crocodilians, have never been utilized as models for studying these disorders in humans. Here, a histological evaluation and staging criteria for osteoderm development is described for the first time in the American alligator (Alligator mississipiensis). Differential staining and immunohistochemistry of alligator scales depict a progressive change during development, where woven bone forms from the differentiated dermis. Bone formation proceeds via intramembranous ossification, which is initiated in part by endothelial cell precursors that undergo endothelial-to-mesenchymal transition and eventually acquire an osteoblast phenotype. As such, the development of osteoderms in the American alligator bears morphological and mechanistic similarities to HO in humans, presenting a potential model for future study of soft tissue mineralization pathologies and providing insight into the morphological and molecular development of osteoderms in other vertebrate lineages. Anat Rec, 2017. © 2017 Wiley Periodicals, Inc. Anat Rec, 301:56-76, 2018. © 2017 Wiley Periodicals, Inc.
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- 2017
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14. Effects of crude oil vapors on the cardiovascular flow of embryonic Gulf killifish
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Camila A. Virgen, David Murphy, Guido F. Verbeck, Benjamin Dubansky, and Sanjib Gurung
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animal structures ,Environmental Engineering ,010504 meteorology & atmospheric sciences ,Gulf killifish ,010501 environmental sciences ,Hematocrit ,01 natural sciences ,Cardiovascular System ,Andrology ,chemistry.chemical_compound ,Coronary Circulation ,Fundulidae ,medicine ,Environmental Chemistry ,Animals ,Petroleum Pollution ,Waste Management and Disposal ,0105 earth and related environmental sciences ,biology ,medicine.diagnostic_test ,Embryogenesis ,Embryo ,Blood flow ,biology.organism_classification ,Pollution ,Embryonic stem cell ,Fundulus ,Petroleum ,chemistry ,Water Pollutants, Chemical ,Toxicant - Abstract
Direct contact with toxicants in crude oil during embryogenesis causes cardiovascular defects, but the effects of exposure to airborne volatile organic compounds released from spilled oil are not well understood. The effects of crude oil-derived airborne toxicants on peripheral blood flow were examined in Gulf killifish (Fundulus grandis) since this model completes embryogenesis in the air. Particle image velocimetry was used to measure in vivo blood flow in intersegmental arteries of control and oil-exposed embryos. Significant effects in oil-exposed embryos included increased pulse rate, reduced mean blood flow speed and volumetric flow rate, and decreased pulsatility, demonstrating that normal-appearing oil-exposed embryos retain underlying cardiovascular defects. Further, hematocrit moderately increased in oil-exposed embryos. This study highlights the potential for fine-scale physiological measurement techniques to better understand the sub-lethal effects of oil exposure and demonstrates the efficacy of Gulf killifish as a unique teleost model for aerial toxicant exposure studies.
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- 2019
15. Mode of Ossification and Extracellular Fiber Characterization of Osteoderm Matrix in the American Alligator ( Alligator mississippiensis ) and Comparisons to Inherited and Acquired Heterotopic Ossification Disorders
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Jacob Raney, Benjamin Dubansky, and Brooke H. Dubansky
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biology ,Ossification ,Alligator ,Anatomy ,Matrix (biology) ,medicine.disease ,biology.organism_classification ,Biochemistry ,Extracellular fiber ,biology.animal ,Genetics ,medicine ,Osteoderm ,Heterotopic ossification ,medicine.symptom ,American alligator ,Molecular Biology ,Biotechnology - Published
- 2020
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16. Alligator Osteoderm Development Resembles the Pathogenesis of Heterotopic Ossification
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Benjamin Dubansky and Brooke H. Dubansky
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Pathogenesis ,biology ,biology.animal ,Alligator ,Genetics ,medicine ,Osteoderm ,Heterotopic ossification ,Anatomy ,medicine.disease ,Molecular Biology ,Biochemistry ,Biotechnology - Published
- 2018
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17. Development and Environment
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Warren Burggren, Benjamin Dubansky, Warren Burggren, and Benjamin Dubansky
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- Environmental toxicology, Developmental biology
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Rather than a loosely connected list of facts/topics, this book addresses virtually every field that involves the use of developing animals in environmental science. In doing so, it will help define the scientific collective within these fields to both those readers who are'outside'of a particular field (students and professionals alike) and those who work within said field, where multiple iterations of the same job description exist. Both the content and choice of authors fully support this goal, as the editors and contributing authors represent contemporary thought and experimentation in their respective fields – ranging from developmental physiology through environmental toxicology to medicine. As such, this work will appeal to a broad audience, including any scientist or trainee interested in the nexus of environment, development and physiology.
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- 2018
18. Methodology for exposing avian embryos to quantified levels of airborne aromatic compounds associated with crude oil spills
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Phillip M. Mach, Warren W. Burggren, Benjamin Dubansky, and Guido F. Verbeck
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0106 biological sciences ,animal structures ,Health, Toxicology and Mutagenesis ,Chick Embryo ,010501 environmental sciences ,Toxicology ,Kidney ,01 natural sciences ,Bird egg ,Mass Spectrometry ,Cytochrome P-450 CYP1A1 ,Ingestion ,Animals ,Petroleum Pollution ,Lung ,0105 earth and related environmental sciences ,Pharmacology ,Air Pollutants ,Volatile Organic Compounds ,Chemistry ,Platelet Count ,010604 marine biology & hydrobiology ,Osmolar Concentration ,Embryo ,General Medicine ,Crude oil ,Biomarker (petroleum) ,Petroleum ,Hematocrit ,Liver ,Deepwater horizon ,Environmental chemistry ,Oil spill ,Toxicity ,Chickens ,Biomarkers ,Water Pollutants, Chemical - Abstract
Oil spills on birds and other organisms have focused primarily on direct effects of oil exposure through ingestion or direct body fouling. Little is known of indirect effects of airborne volatiles from spilled oil, especially on vulnerable developing embryos within the bird egg. Here a technique is described for exposing bird embryos in the egg to quantifiable amounts of airborne volatile toxicants from Deepwater Horizon crude oil. A novel membrane inlet mass spectrometry system was used to measure major classes of airborne oil-derived toxicants and correlate these exposures with biological endpoints. Exposure induced a reduction in platelet number and increase in osmolality of the blood of embryos of the chicken (Gallus gallus). Additionally, expression of cytochrome P4501A, a protein biomarker of oil exposure, occurred in renal, pulmonary, hepatic and vascular tissues. These data confirm that this system for generating and measuring airborne volatiles can be used for future in-depth analysis of the toxicity of volatile organic compounds in birds and potentially other terrestrial organisms.
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- 2018
19. The Nexus of Development and Environment
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Benjamin Dubansky and Warren W. Burggren
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0301 basic medicine ,Climate change ,Environmental ethics ,Animal development ,010501 environmental sciences ,01 natural sciences ,Part iii ,03 medical and health sciences ,030104 developmental biology ,Development (topology) ,Section (archaeology) ,Sociology ,Nexus (standard) ,0105 earth and related environmental sciences ,Theme (narrative) - Abstract
The relationship between environment and animal development has been recognized since the time of Aristotle, but the urgency of creating a thorough understanding of this relationship is emerging as environments in which animals develop are changing as a result of pollution, climate change and other anthropogenic activities. This book, an overview of which is provided in this first chapter, is organized along three key themes. Each theme predominates in its own section – Part I: Plasticity in developmental and evolutionary time and space, Part II: Contemporary experimental approaches, and Part III. Environmental effects and experimental outcomes. Each of its chapters provides a comprehensive, up-to-date assessment of how development and environment are inextricably woven together, and points to future directions for research at their nexus.
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- 2018
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20. The Interaction of Environment and Chronological and Developmental Time
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Benjamin Dubansky
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0301 basic medicine ,ved/biology ,ved/biology.organism_classification_rank.species ,Timeline ,010501 environmental sciences ,01 natural sciences ,Morphological transformation ,03 medical and health sciences ,Developmental timing ,030104 developmental biology ,Evolutionary biology ,Chronological time ,Model organism ,0105 earth and related environmental sciences - Abstract
As organisms develop from embryos to adults, adaptive phenotypes must emerge to meet the demands of the habitat. This physiological and morphological transformation occurs along a continuum, where the emerging traits are often illustrated as landmarks charted along a predictable chronological timeline. Chronological time is measured according to astronomical phenomena, in hours, days, weeks, months, and years. However, developmental timing is largely driven by innate molecular oscillators that are independent of chronological time and species-specific. Environmental stressors can alter the timing of emergence of developmental phenotypes, creating further discord between developmental time and chronological time. Further, variation in the timing of emergence of developmental phenotypes is the norm, rather than the exception both within and between species. Such examples of environmentally driven variation of developmental timing abound, including alteration in development speed within chronological time and alteration of the sequence of emergence of landmark traits. It follows that if treatment groups (or species) are at different developmental stages, experimental comparisons become increasingly complicated. Within the context of the growing use of developmental model organisms in environmental sciences, the effect of alteration of developmental timing is particularly relevant. This is well illustrated in several examples utilized here to describe how alteration of developmental time can be a maladaptive consequence, or an adaptive compensatory response to environmental stressors, which can be selected for during evolution. Thus, such alterations of developmental timing can be measured and accounted for when designing developmental studies and in the interpretation of resultant data.
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- 2018
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21. Deepwater Horizon Oil Spill as a Case Study for Interdisciplinary Cooperation within Developmental Biology, Environmental Sciences and Physiology
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Aaron P. Roberts, Matthew M. Alloy, Benjamin Dubansky, and Warren W. Burggren
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Deepwater horizon ,Ecology (disciplines) ,Oil spill ,Fish species ,Environmental science ,Physiology ,Research initiative ,Crude oil ,humanities ,Life Scientists - Abstract
The Deepwater Horizon Oil Spill in the USA’s Gulf of Mexico created a high degree of exposure of marine organisms to toxic polyaromatic hydrocarbons (PAHs) present in crude oil. To determine the ecological and physiological effects of crude oil on the Gulf of Mexico ecosystem, the Gulf of Mexico Research Initiative created several research consortia to address overreaching questions concerning the biological impacts of the ecology of the Gulf of Mexico that would otherwise be beyond the capabilities of an individual investigator or a small group. One of these consortia, highlighted in this article, is the RECOVER Consortium, which brings together physiologists, developmental biologists, toxicologists and other life scientists to focus on the multifaceted physiological effects of PAHs, especially as they pertain to cardiovascular and metabolic physiology of economically important fish species. Using the Recover Consortium’s interdisciplinary approach to revealing the biological impacts of the Deepwater Horizon Oil Spill as a case study, we make the argument for interdisciplinary teams that bring together scientists with different specialties as an efficient way—and perhaps the only way—to unravel highly complex biological effects of marine oil spills.
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- 2015
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22. Cardiovascular Development in Embryonic and Larval Fishes
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Naim M. Bautista, Benjamin Dubansky, and Warren W. Burggren
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0301 basic medicine ,Cardiac output ,Stroke volume ,Biology ,Embryonic stem cell ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Blood pressure ,Heart rate ,Cardiac conduction ,Heart formation ,Neuroscience ,030217 neurology & neurosurgery ,Homeostasis - Abstract
Embryonic, larval, and juvenile fish develop in environments that frequently present severe challenges, not just to maintain homeostasis, but to survive. Key to survival is a functional cardiovascular system, which transports respiratory gases, nutrients, and wastes in response to varying tissue needs. This review begins with consideration of how the heart and circulation progressively develop to replace respiration by simple diffusion across the surface area of young fishes, and how the circulation may function initially to aid angiogenesis rather than transport. The morphology and regulation of heart formation, including the heart tube, cardiac chambers and valves, and the cardiac conduction systems is discussed, as is myocardial differentiation. Similarly, the process of angiogenesis and the formation of vascular beds are outlined, with brief mention of the secondary circulation and the lymphatic system in developing fishes. A focus of the chapter is the ontogeny of cardiovascular regulation, including regulation of heart rate, blood pressure, stroke volume, cardiac output, and the peripheral vasculature. The cardiovascular system must respond to environmental variation, so the effects of temperature, oxygenation, and toxicants on the functioning of the cardiovascular system are explored. The chapter concludes with a discussion of ongoing and needed technological advances, and our emerging understanding of potential epigenetic influences on developing fishes.
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- 2017
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23. Incubation relative humidity induces renal morphological and physiological remodeling in the embryo of the chicken (Gallus gallus domesticus)
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Warren W. Burggren, Greta Bolin, and Benjamin Dubansky
- Subjects
0106 biological sciences ,0301 basic medicine ,medicine.medical_specialty ,animal structures ,Amniotic fluid ,Osmotic shock ,Physiology ,Renal function ,Chick Embryo ,Biology ,Kidney ,010603 evolutionary biology ,01 natural sciences ,Biochemistry ,03 medical and health sciences ,Internal medicine ,medicine ,Animals ,Molecular Biology ,Embryogenesis ,Osmolar Concentration ,Embryo ,Humidity ,030104 developmental biology ,Endocrinology ,medicine.anatomical_structure ,Osmoregulation ,Homeostasis - Abstract
The metanephric kidneys of the chicken embryo, along with the chorioallantoic membrane, process water and ions to maintain osmoregulatory homeostasis. We hypothesized that changes in relative humidity (RH) and thus osmotic conditions during embryogenesis would alter the developmental trajectory of embryonic kidney function. White leghorn chicken eggs were incubated at one of 25-30% relative humidity, 55-60% relative humidity, and 85-90% relative humidity. Embryos were sampled at days 10, 12, 14, 16, and 18 to examine embryo and kidney mass, glomerular characteristics, body fluid osmolalities, hematological properties, and whole embryo oxygen consumption. Low and especially high RH elevated mortality, which was reflected in a 10-20% lower embryo mass on D18. Low RH altered several glomerular characteristics by day 18, including increased numbers of glomeruli per kidney, increased glomerular perfusion, and increased total glomerular volume, all indicating potentially increased functional kidney capacity. Hematological variables and plasma and amniotic fluid osmolalities remained within normal physiological values. However, the allantoic, amniotic and cloacal fluids had a significant increase in osmolality at most developmental points sampled. Embryonic oxygen consumption increased relative to control at both low and high relative humidities on Day 18, reflecting the increased metabolic costs of osmotic stress. Major differences in both renal structure and performance associated with changes in incubation humidity occurred after establishment of the metanephric kidney and persisted into late development, and likely into the postnatal period. These data indicate that the avian embryo deserves to be further investigated as a promising model for fetal programming of osmoregulatory function, and renal remodeling during osmotic stress.
- Published
- 2016
24. Biomarkers of Aryl-hydrocarbon Receptor Activity in Gulf Killifish (Fundulus grandis) From Northern Gulf of Mexico Marshes Following the Deepwater Horizon Oil Spill
- Author
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Charles D. Rice, Fernando Galvez, Lester F. Barrois, and Benjamin Dubansky
- Subjects
0301 basic medicine ,Marsh ,animal structures ,Health, Toxicology and Mutagenesis ,Sentinel species ,Gulf killifish ,010501 environmental sciences ,Biology ,Toxicology ,01 natural sciences ,Article ,03 medical and health sciences ,Fundulidae ,Ecotoxicology ,Animals ,Petroleum Pollution ,0105 earth and related environmental sciences ,Aryl hydrocarbon receptor activity ,geography ,Gulf of Mexico ,geography.geographical_feature_category ,Estuary ,General Medicine ,biology.organism_classification ,Pollution ,Fundulus ,Fishery ,030104 developmental biology ,Petroleum ,Receptors, Aryl Hydrocarbon ,Wetlands ,Oil spill ,Biomarkers ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Following the Deepwater Horizon oil spill, shorelines throughout the Barataria Basin of the northern Gulf of Mexico in Louisiana were heavily oiled for months with Macondo-252 oil, potentially impacting estuarine species. The Gulf killifish (Fundulus grandis) has been identified as a sentinel species for the study of site-specific effects of crude oil contamination on biological function. In November and December 2010, 4–5 months after the Macondo well was plugged and new oil was no longer spilling into the Gulf waters, Gulf killifish were collected across the Barataria Basin from 14 sites with varying degrees of oiling. Fish collected from oiled sites exhibited biological indications of exposure to oil, including increase in cytochrome P4501A (CYP1A) mRNA transcript and protein abundances in liver tissues. Immunohistochemistry revealed increases in gill, head kidney, and intestinal CYP1A protein at heavily oiled sites. Intestinal CYP1A protein was a sensitive indicator of exposure, indicating that intestinal tissue plays a key role in biotransformation of AHR ligands and that ingestion is a probable route of exposure, warranting additional consideration in future studies.
- Published
- 2016
25. Cross-resistance in Gulf killifish (Fundulus grandis) populations resistant to dioxin-like compounds
- Author
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Benjamin Dubansky, Warren W. Burggren, Cole W. Matson, and Elias M. Oziolor
- Subjects
0301 basic medicine ,Health, Toxicology and Mutagenesis ,Polychlorinated dibenzodioxins ,Population ,Gulf killifish ,010501 environmental sciences ,Aquatic Science ,Dioxins ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Oxygen Consumption ,Fundulidae ,Metals, Heavy ,Animals ,education ,0105 earth and related environmental sciences ,education.field_of_study ,Pyrethroid ,biology ,Ecology ,Aquatic animal ,Heart ,biology.organism_classification ,Fundulus ,030104 developmental biology ,Phenotype ,chemistry ,Larva ,Adaptation ,Reactive Oxygen Species ,Polychlorinated dibenzofurans ,Water Pollutants, Chemical - Abstract
The Houston Ship Channel (HSC) in Houston, Texas is an aquatic environment with a long history of contamination, including polychlorinated dibenzodioxins (PCDD), polychlorinated dibenzofurans (PCDF), polychlorinated biphenyls (PCBs), polycyclic aromatic hydrocarbons (PAHs), and heavy metals. Populations of Gulf killifish (Fundulus grandis) from the HSC have adapted to resist developmental cardiac deformities caused by dioxin-like compounds (DLCs). Contaminants in the HSC have acted as a strong selective pressure on resident Gulf killifish populations. Rapid adaptation can lead to fitness costs, some as a direct result of the mechanisms involved in the adaptive process, whereas other adaptations may be more general. To explore potential fitness costs, we evaluated two Gulf killifish populations with documented resistance to DLC-induced cardiac teratogenesis (Patrick Bayou and Vince Bayou), and one previously characterized reference population (Gangs Bayou). We also characterized a previously unstudied population from Galveston Bay as an additional reference population (Smith Point). We tested the sensitivity of F1 larvae from these four populations to two classes of pesticides (pyrethroid (permethrin) and carbamate (carbaryl)) and two model pro-oxidants (tert-butyl hydroquinone (tBHQ) and tert-butyl hydroperoxide (tBOOH)). In addition, we explored their responses to hypoxia and measured resting metabolic rates (M.O2). Both adapted populations were cross-resistant to the toxicity of carbaryl and both pro-oxidants tested. There were no population differences in sensitivity to permethrin. On the other hand, one reference population (Gangs Bayou) was less sensitive to hypoxia, and maintained a lower M.O2 . However, there were no differences in hypoxia tolerance or resting metabolic rate between the second reference and the two adapted populations. This investigation emphasizes the importance of including multiple reference populations to clearly link fitness costs or cross-resistance to pollution adaptation, rather than to unrelated environmental or ecological differences. When compared to previous literature on adapted populations of Fundulus heteroclitus, we see a mixture of similarities and differences, suggesting that F. grandis adapted phenotypes likely involve multiple mechanisms, which may not be completely consistent among adapted populations.
- Published
- 2016
26. Genomic and physiological footprint of the Deepwater Horizon oil spill on resident marsh fishes
- Author
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Benjamin Dubansky, Fernando Galvez, Vandana Raghunathan, Tzintzuni Garcia, Jennifer L. Roach, Charles D. Rice, Chet Pilley, Charlotte Bodinier, Nan D. Walker, Scott Miles, Andrew Whitehead, and Ronald B. Walter
- Subjects
Fish Proteins ,Marsh ,Gulf killifish ,Ecotoxicology ,Toxicogenetics ,Petroleum Pollution ,Fundulidae ,Science Applications in the Deepwater Horizon Oil Spill Special Feature ,Cytochrome P-450 CYP1A1 ,Animals ,Ecosystem ,Killifish ,Gulf of Mexico ,geography ,Multidisciplinary ,geography.geographical_feature_category ,biology ,Ecology ,biology.organism_classification ,Environmental science ,Water Pollutants, Chemical - Abstract
The biological consequences of the Deepwater Horizon oil spill are unknown, especially for resident organisms. Here, we report results from a field study tracking the effects of contaminating oil across space and time in resident killifish during the first 4 mo of the spill event. Remote sensing and analytical chemistry identified exposures, which were linked to effects in fish characterized by genome expression and associated gill immunohistochemistry, despite very low concentrations of hydrocarbons remaining in water and tissues. Divergence in genome expression coincides with contaminating oil and is consistent with genome responses that are predictive of exposure to hydrocarbon-like chemicals and indicative of physiological and reproductive impairment. Oil-contaminated waters are also associated with aberrant protein expression in gill tissues of larval and adult fish. These data suggest that heavily weathered crude oil from the spill imparts significant biological impacts in sensitive Louisiana marshes, some of which remain for over 2 mo following initial exposures.
- Published
- 2011
- Full Text
- View/download PDF
27. Is Exposure to Macondo Oil Reflected in the Otolith Chemistry of Marsh-Resident Fish?
- Author
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Andrew Whitehead, Olaf P. Jensen, Paola C. López-Duarte, Benjamin Dubansky, Fernando Galvez, Kenneth W. Able, and F. Joel Fodrie
- Subjects
0106 biological sciences ,Salinity ,Gulf killifish ,Marine and Aquatic Sciences ,lcsh:Medicine ,Fresh Water ,010501 environmental sciences ,01 natural sciences ,Biochemistry ,Otolith ,Physical Chemistry ,chemistry.chemical_compound ,Nickel ,Fundulidae ,Medicine and Health Sciences ,Trace metal ,Petroleum Pollution ,Killifish ,lcsh:Science ,Gulf of Mexico ,Multidisciplinary ,biology ,Oil Spills ,Temperature ,Lipids ,Fundulus ,Chemistry ,medicine.anatomical_structure ,Petroleum ,Inner Ear ,Physical Sciences ,Engineering and Technology ,Seasons ,Anatomy ,Research Article ,Freshwater Environments ,Environmental Engineering ,Fish Biology ,Marshes ,Gulfs ,Otolithic Membrane ,Fish physiology ,Bodies of water ,medicine ,Fish Physiology ,Animal Physiology ,Animals ,14. Life underwater ,0105 earth and related environmental sciences ,010604 marine biology & hydrobiology ,Ecology and Environmental Sciences ,lcsh:R ,Biology and Life Sciences ,Aquatic Environments ,Vanadium ,biology.organism_classification ,Vertebrate Physiology ,Trace Elements ,Fishery ,chemistry ,Chemical Properties ,13. Climate action ,Ears ,Earth Sciences ,lcsh:Q ,Hydrology ,Oils ,Head ,Zoology - Abstract
Genomic and physiological responses in Gulf killifish (Fundulus grandis) in the northern Gulf of Mexico have confirmed oil exposure of resident marsh fish following the Macondo blowout in 2010. Using these same fish, we evaluated otolith microchemistry as a method for assessing oil exposure history. Laser-ablation inductively-coupled-plasma mass spectrometry was used to analyze the chemical composition of sagittal otoliths to assess whether a trace metal signature could be detected in the otoliths of F. grandis collected from a Macondo-oil impacted site in 2010, post-spill relative to pre-spill, as well as versus fish from areas not impacted by the spill. We found no evidence of increased concentrations of two elements associated with oil contamination (nickel and vanadium) in F. grandis otoliths regardless of Macondo oil exposure history. One potential explanation for this is that Macondo oil is relatively depleted of those metals compared to other crude oils globally. During and after the spill, however, elevated levels of barium, lead, and to a lesser degree, copper were detected in killifish otoliths at the oil-impacted collection site in coastal Louisiana. This may reflect oil contact or other environmental perturbations that occurred concomitant with oiling. For example, increases in barium in otoliths from oil-exposed fish followed (temporally) freshwater diversions in Louisiana in 2010. This implicates (but does not conclusively demonstrate) freshwater diversions from the Mississippi River (with previously recorded higher concentrations of lead and copper), designed to halt the ingress of oil, as a mechanism for elevated elemental uptake in otoliths of Louisiana marsh fishes. These results highlight the potentially complex and indirect effects of the Macondo oil spill and human responses to it on Gulf of Mexico ecosystems, and emphasize the need to consider the multiple stressors acting simultaneously on inshore fish communities.
- Published
- 2016
28. Response to comment on 'multi-tissue molecular, genomic, and developmental effects of the deepwater horizon oil spill on resident Gulf killifish (Fundulus grandis)'
- Author
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Charles D. Rice, Benjamin Dubansky, Andrew Whitehead, and Fernando Galvez
- Subjects
Male ,biology ,Gulf killifish ,General Chemistry ,Genomics ,biology.organism_classification ,Fundulus ,Fishery ,Oceanography ,Petroleum ,Deepwater horizon ,Fundulidae ,Oil spill ,Environmental Chemistry ,Animals ,Female ,Petroleum Pollution - Published
- 2014
29. Multi-tissue molecular, genomic, and developmental effects of the Deepwater Horizon oil spill on resident Gulf killifish (Fundulus grandis)
- Author
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Charles D. Rice, Benjamin Dubansky, Jeffrey T. Miller, Fernando Galvez, and Andrew Whitehead
- Subjects
Male ,Geologic Sediments ,animal structures ,Gulf killifish ,Article ,Fundulidae ,Animals ,Environmental Chemistry ,Petroleum Pollution ,Tissue Distribution ,Killifish ,Gulf of Mexico ,geography ,geography.geographical_feature_category ,biology ,Estuary ,Genomics ,General Chemistry ,biology.organism_classification ,Fundulus ,Fishery ,Petroleum ,Habitat ,Deepwater horizon ,Oil spill ,Female ,Transcriptome ,Bay - Abstract
The Deepwater Horizon oil rig disaster resulted in crude oil contamination along the Gulf coast in sensitive estuaries. Toxicity from exposure to crude oil can affect populations of fish that live or breed in oiled habitats as seen following the Exxon Valdez oil spill. In an ongoing study of the effects of Deepwater Horizon crude oil on fish, Gulf killifish ( Fundulus grandis ) were collected from an oiled site (Grande Terre, LA) and two reference locations (coastal MS and AL) and monitored for measures of exposure to crude oil. Killifish collected from Grande Terre had divergent gene expression in the liver and gill tissue coincident with the arrival of contaminating oil and up-regulation of cytochrome P4501A (CYP1A) protein in gill, liver, intestine, and head kidney for over one year following peak landfall of oil (August 2011) compared to fish collected from reference sites. Furthermore, laboratory exposures of Gulf killifish embryos to field-collected sediments from Grande Terre and Barataria Bay, LA, also resulted in increased CYP1A and developmental abnormalities when exposed to sediments collected from oiled sites compared to exposure to sediments collected from a reference site. These data are predictive of population-level impacts in fish exposed to sediments from oiled locations along the Gulf of Mexico coast.
- Published
- 2013
30. Reply to Jenkins et al.: Evidence for contaminating oil exposure is closely linked in space and time to biological effects
- Author
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Vandana Raghunathan, Charlotte Bodinier, Andrew Whitehead, Chet Pilley, Jennifer L. Roach, Tzintzuni Garcia, Fernando Galvez, Benjamin Dubansky, Charles D. Rice, Ronald B. Walter, Scott Miles, and Nan D. Walker
- Subjects
Multidisciplinary ,Deepwater horizon ,Oil spill ,%22">Fish ,Zoology ,Killifish ,Letters ,Tissue morphology ,Biology ,Crude oil ,biology.organism_classification ,Protein expression - Abstract
Our original article (1) linked exposure of resident killifish to contaminating oil from the Deepwater Horizon (DWH) oil spill with significant biological responses, including genome expression, protein expression, and tissue morphology. Given decades of laboratory studies on the effects of crude oil in many species, including fish, and after extensive field studies following the Exxon Valdez spill, some of the responses we captured are recognized as diagnostic of exposure to, and effects from, the toxic components of weathered crude oil (e.g., ref. 2). Jenkins et … [↵][1]1To whom correspondence should be addressed. E-mail: awhitehead{at}ucdavis.edu. [1]: #xref-corresp-1-1
- Published
- 2012
31. Influence of cortisol on the attachment and metamorphosis of larval Utterbackia imbecillis on bluegill sunfish (Lepomis macrochirus)
- Author
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Benjamin Dubansky, Fernando Galvez, and Brian Whitaker
- Subjects
Unionidae ,Larva ,biology ,Hydrocortisone ,Ecology ,media_common.quotation_subject ,Metamorphosis, Biological ,Zoology ,Mussel ,Bluegill sunfish ,Ectoparasitic Infestations ,biology.organism_classification ,Perciformes ,Plasma ,Plasma cortisol ,Utterbackia imbecillis ,Juvenile ,Animals ,Metamorphosis ,General Agricultural and Biological Sciences ,Lepomis macrochirus ,media_common - Abstract
The larvae of unionid freshwater mussels (i.e., glochidia) undergo a parasitic stage requiring their attachment to the external epithelia of fish hosts, where they metamorphose into free-living juveniles. We describe the physiological effects in bluegill sunfish (Lepomis macrochirus) of infection with glochidia from the paper pondshell (Utterbackia imbecillis). Glochidia accumulation on bluegill increased dramatically at concentrations of 2000 glochidia liter(-1) and above, reaching a maximum attachment density of about 30 glochidia g(-1) fish at 4000 glochidia liter(-1). Plasma cortisol was the most sensitive indicator of biological effect to glochidial exposure, increasing significantly in hosts exposed to 2000 glochidia liter(-1) or greater. Glochidia were 31% more likely to undergo successful juvenile metamorphosis when attached to bluegill with elevated plasma cortisol, largely due to the enhanced survivorship of these larvae during the first 48 h after infection. We tested the hypothesis that glochidial attachment and juvenile metamorphosis were stimulated directly by plasma cortisol in fish hosts. Bluegill were given an intraperitoneal injection of cortisol, then infected with 1000 glochidia liter(-1) at 48 h after hormone supplementation. Cortisol-injected fish had a 42% increase in the number of attached glochidia g(-1) fish and a 28% increase in larval metamorphosis compared to sham-injected and control fish. We provide evidence that cortisol enhances glochidial metamorphosis on hosts by improving the retention of attached glochidia. This study gives insights into the influence of host physiology on glochidial attachment and juvenile mussel transformation.
- Published
- 2011
32. Experimental assessment of cardiovascular physiology in the chick embryo.
- Author
-
Sukumaran, Vijayakumar, Mutlu, Onur, Murtaza, Mohammad, Alhalbouni, Rawia, Dubansky, Benjamin, and Yalcin, Huseyin C.
- Subjects
CHICKEN embryos ,EMBRYONIC physiology ,OPTICAL coherence tomography ,DOPPLER echocardiography ,FLOW velocity - Abstract
High resolution assessment of cardiac functional parameters is crucial in translational animal research. The chick embryo is a historically well‐used in vivo model for cardiovascular research due to its many practical advantages, and the conserved form and function of the chick and human cardiogenesis programs. This review aims to provide an overview of several different technical approaches for chick embryo cardiac assessment. Doppler echocardiography, optical coherence tomography, micromagnetic resonance imaging, microparticle image velocimetry, real‐time pressure monitoring, and associated issues with the techniques will be discussed. Alongside this discussion, we also highlight recent advances in cardiac function measurements in chick embryos. Key Findings: Studying the physiology of the chick embryo is critical to understand many diseases such as CHDs.Advancements have been made in techniques to measure the blood flow velocity such as using Doppler Electrocardiography, Optical Coherence Tomography and micro‐MRI.Measurement of Blood pressure is equally important and techniques have been developed to measure the blood pressure through direct measurement and through servo null micropressure technique. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
33. Assessing Pressure–Volume Relationship in Developing Heart of Zebrafish In-Vivo.
- Author
-
Salehin, Nabid, Villarreal, Cameron, Teranikar, Tanveer, Dubansky, Benjamin, Lee, Juhyun, and Chuong, Cheng-Jen
- Abstract
During embryogenesis, the developing heart transforms from a linear peristaltic tube into a multi-chambered pulsatile pump with blood flow-regulating valves. In this work, we report how hemodynamic parameters evolve during the heart's development, leading to its rhythmic pumping and blood flow regulation as a functioning organ. We measured the time course of intra-ventricular pressure from zebrafish embryos at 3, 4, and 5 days post fertilization (dpf) using the servo null method. We also measured the ventricular volume and monitored the opening/closing activity of the AV and VB valves using 4D selective plane illumination microscopy (SPIM). Our results revealed significant increases in peak systolic pressure, stroke volume and work, cardiac output, and power generation, and a total peripheral resistance decrease from zebrafish at 4, 5 dpf versus 3 dpf. These data illustrate that the early-stage zebrafish heart's increasing efficiency is synchronous with the expected changes in valve development, chamber morphology and increasing vascular network complexity. Such physiological measurements in tractable laboratory model organisms are critical for understanding how gene variants may affect phenotype. As the zebrafish emerges as a leading biomedical model organism, the ability to effectively measure its physiology is critical to its translational relevance. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
34. Embryotoxicity and Physiological Compensation in Chicken Embryos Exposed to Crude Oil.
- Author
-
Amaral‐Silva, Lara, Rojas‐Antich, Maria Carolina, Dubansky, Benjamin, Tazawa, Hiroshi, and Burggren, Warren W.
- Subjects
ERYTHROCYTES ,BIRD eggs ,PETROLEUM ,BLOOD lactate ,OIL spills ,PARTIAL pressure ,CHICKEN embryos - Abstract
Terrestrial, marine, or aquatic oil spills can directly or indirectly contaminate bird eggs. We hypothesized that chicken embryos exposed to crude oil can physiologically compensate to mitigate the potentially toxic effect of lower doses of oil. Embryos exposed to 0, 1, 3, or 5 µL of oil on embryonic days 4 and 10 were initially analyzed for mortality. All oil doses decreased day 4 embryo survival, but only the 2 highest oil doses lowered survival when applied on day 10. Thus, day 15 embryos treated with 1, 3, and 5 µL of source oil on day 10 had arterialized blood analyzed. The hematological variables hematocrit, red blood cell concentration ([RBC]), and hemoglobin concentration increased in response to 1 µL, were unchanged by 3 µL, and decreased by 5 µL of oil treatment. No changes occurred in arterialized blood gas variables (partial pressure of O2 [PO2], pH, bicarbonate concentration) for 1 and 3 µL embryos, but 5 µL of oil decreased PO2 and caused metabolic acidosis. Increased blood lactate in embryos treated with 3 and 5 µL of oil was correlated with decreased hematocrit and [RBC] and increased body mass, the latter likely reflecting edema. We conclude that embryos in middle development physiologically compensated for negative effects of lower doses of crude oil but that higher doses of oil were harmful to the embryos at all developmental stages. Environ Toxicol Chem 2021;40:2347–2358. © 2021 SETAC [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
35. Acknowledgment to reviewers.
- Subjects
SCHOLARLY peer review - Abstract
The high standard maintained by I Journal of Histotechnology i owes much to the work of reviewers who generously contribute their time and expertise. We gratefully acknowledge the support of the following scholars who have reviewed papers for the journal from 2018 to 2019: Philip Philip. [Extracted from the article]
- Published
- 2020
- Full Text
- View/download PDF
36. Exposure to diesel exhaust particles results in altered lung microbial profiles, associated with increased reactive oxygen species/reactive nitrogen species and inflammation, in C57Bl/6 wildtype mice on a high-fat diet.
- Author
-
Daniel, Sarah, Phillippi, Danielle, Schneider, Leah J., Nguyen, Kayla N., Mirpuri, Julie, and Lund, Amie K.
- Subjects
REACTIVE nitrogen species ,REACTIVE oxygen species ,PROBIOTICS ,HIGH-fat diet ,NF-kappa B ,IDIOPATHIC pulmonary fibrosis - Abstract
Background: Exposure to traffic-generated emissions is associated with the development and exacerbation of inflammatory lung disorders such as chronic obstructive pulmonary disorder (COPD) and idiopathic pulmonary fibrosis (IPF). Although many lung diseases show an expansion of Proteobacteria, the role of traffic-generated particulate matter pollutants on the lung microbiota has not been well-characterized. Thus, we investigated the hypothesis that exposure to diesel exhaust particles (DEP) can alter commensal lung microbiota, thereby promoting alterations in the lung's immune and inflammatory responses. We aimed to understand whether diet might also contribute to the alteration of the commensal lung microbiome, either alone or related to exposure. To do this, we used male C57Bl/6 mice (4–6-week-old) on either regular chow (LF) or high-fat (HF) diet (45% kcal fat), randomly assigned to be exposed via oropharyngeal aspiration to 35 μg DEP, suspended in 35 μl 0.9% sterile saline or sterile saline only (control) twice a week for 30 days. A separate group of study animals on the HF diet was concurrently treated with 0.3 g/day of Winclove Ecologic® Barrier probiotics in their drinking water throughout the study. Results: Our results show that DEP-exposure increases lung tumor necrosis factor (TNF)-α, interleukin (IL)-10, Toll-like receptor (TLR)-2, TLR-4, and the nuclear factor kappa B (NF-κB) histologically and by RT-qPCR, as well as Immunoglobulin A (IgA) and Immunoglobulin G (IgG) in the bronchoalveolar lavage fluid (BALF), as quantified by ELISA. We also observed an increase in macrophage infiltration and peroxynitrite, a marker of reactive oxygen species (ROS) + reactive nitrogen species (RNS), immunofluorescence staining in the lungs of DEP-exposed and HF-diet animals, which was further exacerbated by concurrent DEP-exposure and HF-diet consumption. Histological examinations revealed enhanced inflammation and collagen deposition in the lungs DEP-exposed mice, regardless of diet. We observed an expansion of Proteobacteria, by qPCR of bacterial 16S rRNA, in the BALF of DEP-exposed mice on the HF diet, which was diminished with probiotic-treatment. Conclusions: Our findings suggest that exposure to DEP causes persistent and sustained inflammation and bacterial alterations in a ROS-RNS mediated fashion, which is exacerbated by concurrent consumption of an HF diet. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
37. A review of alligator and snake skin morphology and histotechnical preparations.
- Author
-
Dubansky, Brooke H. and Close, Matthew
- Subjects
AMERICAN alligator ,EPIDERMIS ,ALLIGATORS ,EPITHELIUM ,KERATIN - Abstract
The anatomy, biochemistry, biomechanics, and evolution of reptile integument have been topics of intense interest in the scientific community for at least two centuries. As such, histological techniques were, and still are, employed to provide a comprehensive understanding of the relationships between tissue structure, function, and the evolution of reptile integument. However, histotechnical preparations of reptile skin present many challenges related to the unique microanatomical configuration of the integument in these animals. Reptilian epidermal scales may be thick and corneous and are often not penetrated well by either processing fluids or embedding media. The reptile dermis is a composite of several different tissue types with a range of biophysical properties creating many problems with tissue processing, sectioning, and staining. Further, lepidosaurs (snakes, lizards, and tuataras) exhibit epidermal modifications associated with the shedding cycle (i.e. ecdysis) that may also create histotechnical artifacts. Here, this study reviews the general skin morphology from crocodilians (alligators, crocodiles, and gharials) and lepidosaurs. Common difficulties encountered while preparing this organ for histological examination are explained and highlighted, and technical solutions and protocols are provided that mitigate these problems. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
38. Editorial highlights.
- Author
-
Trainor, Paul A.
- Subjects
DEVELOPMENTAL biology ,HEART conduction system ,CARDIOVASCULAR development ,NEURAL crest ,GENE regulatory networks - Abstract
However, pax2a maintains both fates downstream of these signaling pathways, and similarities in mouse embryos suggest this is indicative of a broadly conserved developmental mechanism. Every organism is a model organism for understanding development, evolution, disease, and regeneration, and we have only begun to scratch the surface of the interdisciplinary genetic, molecular, cellular, and developmental mechanisms that regulate these biological processes. Genetic variants in I SIX1 i can cause Branchio-oto-renal (BOR) syndrome and transcriptional profiling of I Six1 i mutant mouse embryos identified numerous differentially expressed genes involved in translation, neural crest cell differentiation, osteogenesis, chondrogenesis and Wnt signaling with implications for BOR syndrome disease pathogenesis. [Extracted from the article]
- Published
- 2023
- Full Text
- View/download PDF
39. Comment on "Multitissue Molecular, Genomic, and Developmental Effects of the Deepwater Horizon Oil Spill on Resident Gulf Killifish (Fundulus grandis)".
- Author
-
Pearson, Walter H.
- Subjects
- *
BP Deepwater Horizon Explosion & Oil Spill, 2010 -- Environmental aspects , *EFFECT of oil spills on fishes , *FUNDULUS - Abstract
A letter to the editor is presented in response to the article "Multitissue Molecular, Genomic, and Developmental Effects of the Deepwater Horizon Oil Spill on Resident Gulf Killifish (Fundulus grandis)" by Benjamin Dubansky and Andrew Whitehead et al. in a 2013 issue.
- Published
- 2014
- Full Text
- View/download PDF
40. Biomarkers of Aryl-hydrocarbon Receptor Activity in Gulf Killifish ( Fundulus grandis) From Northern Gulf of Mexico Marshes Following the Deepwater Horizon Oil Spill.
- Author
-
Dubansky, Benjamin, Rice, Charles, Barrois, Lester, and Galvez, Fernando
- Subjects
OIL spills & the environment ,OIL spills ,KILLIFISHES ,OIL pollution of water ,OIL pollution of the sea ,MARINE pollution - Abstract
Following the Deepwater Horizon oil spill, shorelines throughout the Barataria Basin of the northern Gulf of Mexico in Louisiana were heavily oiled for months with Macondo-252 oil, potentially impacting estuarine species. The Gulf killifish ( Fundulus grandis) has been identified as a sentinel species for the study of site-specific effects of crude oil contamination on biological function. In November and December 2010, 4-5 months after the Macondo well was plugged and new oil was no longer spilling into the Gulf waters, Gulf killifish were collected across the Barataria Basin from 14 sites with varying degrees of oiling. Fish collected from oiled sites exhibited biological indications of exposure to oil, including increase in cytochrome P4501A (CYP1A) mRNA transcript and protein abundances in liver tissues. Immunohistochemistry revealed increases in gill, head kidney, and intestinal CYP1A protein at heavily oiled sites. Intestinal CYP1A protein was a sensitive indicator of exposure, indicating that intestinal tissue plays a key role in biotransformation of AHR ligands and that ingestion is a probable route of exposure, warranting additional consideration in future studies. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
41. Dynamics of epigenetic phenomena: intergenerational and intragenerational phenotype 'washout'.
- Author
-
Burggren, Warren W.
- Subjects
EPIGENETICS ,PHENOTYPES ,COMPARATIVE biology ,HEREDITY ,GENOTYPE-environment interaction - Abstract
Epigenetic studies of both intragenerational and transgenerational epigenetic phenotypic modifications have proliferated in the last few decades. However, the strong reductionist focus on mechanism that prevails in many epigenetic studies to date has diverted attention away what might be called the 'dynamics' of epigenetics and its role in comparative biology. Epigenetic dynamics describes how both transgenerational and intragenerational epigenetic phenotypic modifications change in non-linear patterns over time. Importantly, a dynamic perspective suggests that epigenetic phenomena should not be regarded as 'digital' (on-off), in which a modified trait necessarily suddenly disappears between one generation and the next. Rather, dynamic epigenetic phenomena may be better depicted by graded, time-related changes that can potentially involve the 'washout' of modified phenotype both within and across generations. Conceivably, an epigenetic effect might also 'wash-in' over multiple generations, and there may be unexplored additive effects resulting from the pressures of environmental stressors that wax, wane and then wax again across multiple generations. Recognition of epigenetic dynamics is also highly dependent on the threshold for detection of the phenotypic modification of interest, especially when phenotypes wash out or wash in. Thus, studies of transgenerational epigenetic effects (and intragenerational effects, for that matter) that search for persistence of the phenomenon are best conducted with highly sensitive, precise quantitative methods. All of the scenarios in this review representing epigenetic dynamics are possible and some even likely. Focused investigations that concentrate on the time course will reveal much about both the impact and mechanisms of epigenetic phenomena. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
42. BRNADON BALLENGÉE - COLLAPSE: THE CRY OF SILENT FORMS.
- Author
-
Berg, Katia
- Abstract
Brandon Ballengée explores the boundaries between art, science and technology by creating artworks from information generated by ecological field trips. Brandon's work includes environmental art and scientific research that encourages discussion about the human effects on the planet. Here he discusses his most recent body of work with Katia Berg. [ABSTRACT FROM AUTHOR]
- Published
- 2014
43. Genomic and physiological footprint of the Deepwater Horizon oil spill on resident marsh fishes.
- Author
-
Whitehead, Andrew, Dubansky, Benjamin, Bodinier, Charlotte, Garcia, Tzintzuni I., Miles, Scott, Pilley, Chet, Raghunathan, Vandana, Roach, Jennifer L., Walker, Nan, Walter, Ronald B., Rice, Charles D., and Galvez, Fernando
- Subjects
FISHES ,BP Deepwater Horizon Explosion & Oil Spill, 2010 ,OIL wells ,REMOTE sensing - Abstract
The biological consequences of the Deepwater Horizon oil spill are unknown, especially for resident organisms. Here, we report results from a field study tracking the effects of contaminating oil across space and time in resident killifish during the first 4 mo of the spill event. Remote sensing and analytical chemistry identified exposures, which were linked to effects in fish characterized by genome expression and associated gill immunohistochemistry, despite very low concentrations of hydrocarbons remaining in water and tissues. Divergence in genome expression coincides with contaminating oil and is consistent with genome responses that are predictive of exposure to hydrocarbon-like chemicals and indicative of physiological and reproductive impairment. Oil-contaminated waters are also associated with aberrant protein expression in gill tissues of larval and adult fish. These data suggest that heavily weathered crude oil from the spill imparts significant biological impacts in sensitive Louisiana marshes, some of which remain for over 2 mo following initial exposures. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
44. Underlying Ossification Phenotype in a Murine Model of Metastatic Synovial Sarcoma.
- Author
-
Kirkham, Matthew, Kalivas, Austen, Fatema, Kaniz, Luelling, Sarah, Dubansky, Brooke H., Dubansky, Benjamin, Jones, Kevin B., and Barrott, Jared J.
- Subjects
SYNOVIOMA ,OSSIFICATION ,SARCOMA ,BONE growth ,GENETIC models - Abstract
Synovial sarcoma, an uncommon cancer, typically affects young adults. Survival rates range from 36% to 76%, decreasing significantly when metastases are present. Synovial sarcomas form in soft tissues, often near bones, with about 10% demonstrating ossification in the tumor. The literature is inconclusive on whether the presence of ossification portends a worse prognosis. To this end, we analyzed our genetic mouse models of synovial sarcoma to determine the extent of ossification in the tumors and its relationship with morbidity. We noted higher ossification within our metastatic mouse model of synovial sarcoma. Not only did we observe ossification within the tumors at a frequency of 7%, but an even higher frequency, 72%, of bone reactivity was detected by radiography. An enrichment of bone development genes was associated with primary tumors, even in the absence of an ossification phenotype. In spite of the ossification being intricately linked with the metastatic model, the presence of ossification was not associated with a faster or worse morbidity in the mice. Our conclusion is that both metastasis and ossification are dependent on time, but that they are independent of one another. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
45. Corrections.
- Subjects
FRICTION ,MONOMOLECULAR films ,BP Deepwater Horizon Explosion & Oil Spill, 2010 ,SELAGINELLA ,TERPENES - Abstract
Corrections to articles in previous issues including "Static and Dynamic Friction in Sliding Colloidal Monolayers," in the October 9, 2012 issue, "Genomic and Physiological Footprint of the Deepwater Horizon Oil Spill on Resident Marsh Fishes," in the December 11, 2012 issue, and "Nonseed Plant Selaginella moellendorfii has Both Seed Plant and Microbial Types of Terpene Synthases," in the September 4, 2012 issue are presented.
- Published
- 2012
- Full Text
- View/download PDF
46. Development and Environment.
- Author
-
Snell-Rood, Emilie
- Subjects
DEVELOPMENTAL biology ,HUMAN biology ,ECOLOGY ,CARDIOPULMONARY system ,ENVIRONMENTAL sciences - Published
- 2019
- Full Text
- View/download PDF
47. Conservation Physiology : Applications for Wildlife Conservation and Management
- Author
-
Christine L. Madliger, Craig E. Franklin, Oliver P. Love, Steven J. Cooke, Christine L. Madliger, Craig E. Franklin, Oliver P. Love, and Steven J. Cooke
- Subjects
- Physiology, Comparative, Wildlife management, Animal ecophysiology
- Abstract
Conservation physiology is a rapidly expanding, multidisciplinary field that utilizes physiological knowledge and tools to understand and solve conservation challenges. This novel text provides the first consolidated overview of its scope, purpose, and applications, with a focus on wildlife. It outlines the major avenues and advances by which conservation physiology is contributing to the monitoring, management, and restoration of wild animal populations. This book also defines opportunities for further growth in the field and identifies critical areas for future investigation. By using a series of global case studies, contributors illustrate how approaches from the conservation physiology toolbox can tackle a diverse range of conservation issues including the monitoring of environmental stress, predicting the impact of climate change, understanding disease dynamics, improving captive breeding, and reducing human-wildlife conflict. Moreover, by acting as practical road maps across a diversity of sub-disciplines, these case studies serve to increase the accessibility of this discipline to new researchers. The diversity of taxa, biological scales, and ecosystems highlighted illustrate the far-reaching nature of the discipline and allow readers to gain an appreciation for the purpose, value, applicability, and status of the field of conservation physiology. Conservation Physiology is an accessible supplementary textbook suitable for graduate students, researchers, and practitioners in the fields of conservation science, eco-physiology, evolutionary and comparative physiology, natural resources management, ecosystem health, veterinary medicine, animal physiology, and ecology.
- Published
- 2021
48. Plastic Ocean: Art and Science Responses to Marine Pollution
- Author
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Ingeborg Reichle and Ingeborg Reichle
- Subjects
- Plastic marine debris--Social aspects, Microplastics, Sea in art, Ecology in art, Environmental degradation in art, Plastic marine debris--Environmental aspects
- Abstract
Our oceans are in an ecological crisis due to their contamination with millions of tons of toxic microplastic particles. In just a few years, the volume of microplastic particles will exceed that of plankton in our oceans and turn them into a huge sea of plastic. This publication brings together numerous international art projects related to environmental activities, DIY biotechnology, and science, and draws attention to the irreversible destruction of our marine ecosystems – the current threat posed by the loss of marine animal biodiversity, for example, or the decline in oxygen production due to massive plankton loss. It also presents current scientific findings on sustainable alternatives to plastic.
- Published
- 2021
49. Collaborations of Consequence : NAKFI's 15 Years Igniting Innovation at the Intersections of Disciplines
- Author
-
The National Academies Keck Futures Initiative and The National Academies Keck Futures Initiative
- Subjects
- Interdisciplinary research, Research
- Abstract
This publication represents the culmination of the National Academies Keck Futures Initiative (NAKFI), a program of the National Academy of Sciences, the National Academy of Engineering, and the National Academy of Medicine supported by a 15-year, $40 million grant from the W. M. Keck Foundation to advance the future of science through interdisciplinary research. From 2003 to 2017, more than 2,000 researchers and other professionals across disciplines and sectors attended an annual'think-tank'style conference to contemplate real-world challenges. Seed grants awarded to conference participants enabled further pursuit of bold, new research and ideas generated at the conference.
- Published
- 2018
50. Discovering the Deep Blue Sea : Research, Innovation, Social Engagement
- Author
-
The National Academies Keck Futures Initiative and The National Academies Keck Futures Initiative
- Subjects
- Deep-sea animals--Climatic factors--Congresses, Aquaculture--Climatic factors--Congresses, Biodiversity--Climatic factors--Congresses
- Abstract
The 14th annual National Academies Keck Futures Initiative (NAKFI),'Discovering the Deep Blue Sea: Research, Innovation, and Social Engagement', brought together 170 marine scientists, professional artists, engineers, biomedical researchers, oceanographers, music professors, and undergraduate design students. The attendees collaborated to find solutions to overarching social and scientific research problems tied to five sub-topics: aquaculture and energy; technology; climate-related change; biodiversity; and communication, adaption, and resilience. This publication summarizes the presentations and discussions from this event.
- Published
- 2018
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