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Genetic variation and gene expression across multiple tissues and developmental stages in a nonhuman primate.

Authors :
Jasinska, Anna J
Jasinska, Anna J
Zelaya, Ivette
Service, Susan K
Peterson, Christine B
Cantor, Rita M
Choi, Oi-Wa
DeYoung, Joseph
Eskin, Eleazar
Fairbanks, Lynn A
Fears, Scott
Furterer, Allison E
Huang, Yu S
Ramensky, Vasily
Schmitt, Christopher A
Svardal, Hannes
Jorgensen, Matthew J
Kaplan, Jay R
Villar, Diego
Aken, Bronwen L
Flicek, Paul
Nag, Rishi
Wong, Emily S
Blangero, John
Dyer, Thomas D
Bogomolov, Marina
Benjamini, Yoav
Weinstock, George M
Dewar, Ken
Sabatti, Chiara
Wilson, Richard K
Jentsch, J David
Warren, Wesley
Coppola, Giovanni
Woods, Roger P
Freimer, Nelson B
Jasinska, Anna J
Jasinska, Anna J
Zelaya, Ivette
Service, Susan K
Peterson, Christine B
Cantor, Rita M
Choi, Oi-Wa
DeYoung, Joseph
Eskin, Eleazar
Fairbanks, Lynn A
Fears, Scott
Furterer, Allison E
Huang, Yu S
Ramensky, Vasily
Schmitt, Christopher A
Svardal, Hannes
Jorgensen, Matthew J
Kaplan, Jay R
Villar, Diego
Aken, Bronwen L
Flicek, Paul
Nag, Rishi
Wong, Emily S
Blangero, John
Dyer, Thomas D
Bogomolov, Marina
Benjamini, Yoav
Weinstock, George M
Dewar, Ken
Sabatti, Chiara
Wilson, Richard K
Jentsch, J David
Warren, Wesley
Coppola, Giovanni
Woods, Roger P
Freimer, Nelson B
Source :
Nature genetics; vol 49, iss 12, 1714-1721; 1061-4036
Publication Year :
2017

Abstract

By analyzing multitissue gene expression and genome-wide genetic variation data in samples from a vervet monkey pedigree, we generated a transcriptome resource and produced the first catalog of expression quantitative trait loci (eQTLs) in a nonhuman primate model. This catalog contains more genome-wide significant eQTLs per sample than comparable human resources and identifies sex- and age-related expression patterns. Findings include a master regulatory locus that likely has a role in immune function and a locus regulating hippocampal long noncoding RNAs (lncRNAs), whose expression correlates with hippocampal volume. This resource will facilitate genetic investigation of quantitative traits, including brain and behavioral phenotypes relevant to neuropsychiatric disorders.

Details

Database :
OAIster
Journal :
Nature genetics; vol 49, iss 12, 1714-1721; 1061-4036
Notes :
application/pdf, Nature genetics vol 49, iss 12, 1714-1721 1061-4036
Publication Type :
Electronic Resource
Accession number :
edsoai.on1367455370
Document Type :
Electronic Resource