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Genome-wide association study of classical Hodgkin lymphoma identifies key regulators of disease susceptibility

Authors :
Sud, Amit
Thomsen, Hauke
Law, Philip J.
Foersti, Asta
da Silva Filho, Miguel Inacio
Holroyd, Amy
Broderick, Peter
Orlando, Giulia
Lenive, Oleg
Wright, Lauren
Cooke, Rosie
Easton, Douglas
Pharoah, Paul
Dunning, Alison
Peto, Julian
Canzian, Federico
Eeles, Rosalind
Kote-Jarai, ZSofia
Muir, Kenneth
Pashayan, Nora
Hoffmann, Per
Noethen, Markus M.
Joeckel, Karl-Heinz
von Strandmann, Elke Pogge
Lightfoot, Tracy
Kane, Eleanor
Roman, Eve
Lake, Annette
Montgomery, Dorothy
Jarrett, Ruth F.
Swerdlow, Anthony J.
Engert, Andreas
Orr, Nick
Hemminki, Kari
Houlston, Richard S.
Sud, Amit
Thomsen, Hauke
Law, Philip J.
Foersti, Asta
da Silva Filho, Miguel Inacio
Holroyd, Amy
Broderick, Peter
Orlando, Giulia
Lenive, Oleg
Wright, Lauren
Cooke, Rosie
Easton, Douglas
Pharoah, Paul
Dunning, Alison
Peto, Julian
Canzian, Federico
Eeles, Rosalind
Kote-Jarai, ZSofia
Muir, Kenneth
Pashayan, Nora
Hoffmann, Per
Noethen, Markus M.
Joeckel, Karl-Heinz
von Strandmann, Elke Pogge
Lightfoot, Tracy
Kane, Eleanor
Roman, Eve
Lake, Annette
Montgomery, Dorothy
Jarrett, Ruth F.
Swerdlow, Anthony J.
Engert, Andreas
Orr, Nick
Hemminki, Kari
Houlston, Richard S.
Publication Year :
2017

Abstract

Several susceptibility loci for classical Hodgkin lymphoma have been reported. However, much of the heritable risk is unknown. Here, we perform a meta-analysis of two existing genome-wide association studies, a new genome-wide association study, and replication totalling 5,314 cases and 16,749 controls. We identify risk loci for all classical Hodgkin lymphoma at 6q22.33 (rs9482849, P = 1.52 x 10(-8)) and for nodular sclerosis Hodgkin lymphoma at 3q28 (rs4459895, P = 9.43 x 10(-17)), 6q23.3 (rs6928977, P = 4.62 x 10(-11)), 10p14 (rs3781093, P = 9.49 x 10(-13)), 13q34 (rs112998813, P = 4.58 x 10(-8)) and 16p13.13 (rs34972832, P= 2.12 x 10(-8)). Additionally, independent loci within the HLA region are observed for nodular sclerosis Hodgkin lymphoma (rs9269081, HLA-DPB1* 03:01, Val86 in HLA-DRB1) and mixed cellularity Hodgkin lymphoma (rs1633096, rs13196329, Val86 in HLADRB1). The new and established risk loci localise to areas of active chromatin and show an over-representation of transcription factor binding for determinants of B-cell development and immune response.

Details

Database :
OAIster
Notes :
English
Publication Type :
Electronic Resource
Accession number :
edsoai.on1364915932
Document Type :
Electronic Resource