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Genome-wide meta-analysis of myopia and hyperopia provides evidence for replication of 11 loci.

Authors :
Simpson, Claire L
Simpson, Claire L
Wojciechowski, Robert
Oexle, Konrad
Murgia, Federico
Portas, Laura
Li, Xiaohui
Verhoeven, Virginie JM
Vitart, Veronique
Schache, Maria
Hosseini, S Mohsen
Hysi, Pirro G
Raffel, Leslie J
Cotch, Mary Frances
Chew, Emily
Klein, Barbara EK
Klein, Ronald
Wong, Tien Yin
van Duijn, Cornelia M
Mitchell, Paul
Saw, Seang Mei
Fossarello, Maurizio
Wang, Jie Jin
DCCT/EDIC Research Group
Polašek, Ozren
Campbell, Harry
Rudan, Igor
Oostra, Ben A
Uitterlinden, André G
Hofman, Albert
Rivadeneira, Fernando
Amin, Najaf
Karssen, Lennart C
Vingerling, Johannes R
Döring, Angela
Bettecken, Thomas
Bencic, Goran
Gieger, Christian
Wichmann, H-Erich
Wilson, James F
Venturini, Cristina
Fleck, Brian
Cumberland, Phillippa M
Rahi, Jugnoo S
Hammond, Chris J
Hayward, Caroline
Wright, Alan F
Paterson, Andrew D
Baird, Paul N
Klaver, Caroline CW
Rotter, Jerome I
Pirastu, Mario
Meitinger, Thomas
Bailey-Wilson, Joan E
Stambolian, Dwight
Simpson, Claire L
Simpson, Claire L
Wojciechowski, Robert
Oexle, Konrad
Murgia, Federico
Portas, Laura
Li, Xiaohui
Verhoeven, Virginie JM
Vitart, Veronique
Schache, Maria
Hosseini, S Mohsen
Hysi, Pirro G
Raffel, Leslie J
Cotch, Mary Frances
Chew, Emily
Klein, Barbara EK
Klein, Ronald
Wong, Tien Yin
van Duijn, Cornelia M
Mitchell, Paul
Saw, Seang Mei
Fossarello, Maurizio
Wang, Jie Jin
DCCT/EDIC Research Group
Polašek, Ozren
Campbell, Harry
Rudan, Igor
Oostra, Ben A
Uitterlinden, André G
Hofman, Albert
Rivadeneira, Fernando
Amin, Najaf
Karssen, Lennart C
Vingerling, Johannes R
Döring, Angela
Bettecken, Thomas
Bencic, Goran
Gieger, Christian
Wichmann, H-Erich
Wilson, James F
Venturini, Cristina
Fleck, Brian
Cumberland, Phillippa M
Rahi, Jugnoo S
Hammond, Chris J
Hayward, Caroline
Wright, Alan F
Paterson, Andrew D
Baird, Paul N
Klaver, Caroline CW
Rotter, Jerome I
Pirastu, Mario
Meitinger, Thomas
Bailey-Wilson, Joan E
Stambolian, Dwight
Source :
PloS one; vol 9, iss 9, e107110; 1932-6203
Publication Year :
2014

Abstract

Refractive error (RE) is a complex, multifactorial disorder characterized by a mismatch between the optical power of the eye and its axial length that causes object images to be focused off the retina. The two major subtypes of RE are myopia (nearsightedness) and hyperopia (farsightedness), which represent opposite ends of the distribution of the quantitative measure of spherical refraction. We performed a fixed effects meta-analysis of genome-wide association results of myopia and hyperopia from 9 studies of European-derived populations: AREDS, KORA, FES, OGP-Talana, MESA, RSI, RSII, RSIII and ERF. One genome-wide significant region was observed for myopia, corresponding to a previously identified myopia locus on 8q12 (p = 1.25×10(-8)), which has been reported by Kiefer et al. as significantly associated with myopia age at onset and Verhoeven et al. as significantly associated to mean spherical-equivalent (MSE) refractive error. We observed two genome-wide significant associations with hyperopia. These regions overlapped with loci on 15q14 (minimum p value = 9.11×10(-11)) and 8q12 (minimum p value 1.82×10(-11)) previously reported for MSE and myopia age at onset. We also used an intermarker linkage- disequilibrium-based method for calculating the effective number of tests in targeted regional replication analyses. We analyzed myopia (which represents the closest phenotype in our data to the one used by Kiefer et al.) and showed replication of 10 additional loci associated with myopia previously reported by Kiefer et al. This is the first replication of these loci using myopia as the trait under analysis. "Replication-level" association was also seen between hyperopia and 12 of Kiefer et al.'s published loci. For the loci that show evidence of association to both myopia and hyperopia, the estimated effect of the risk alleles were in opposite directions for the two traits. This suggests that these loci are important contributors to variation of refractive error acros

Details

Database :
OAIster
Journal :
PloS one; vol 9, iss 9, e107110; 1932-6203
Notes :
application/pdf, PloS one vol 9, iss 9, e107110 1932-6203
Publication Type :
Electronic Resource
Accession number :
edsoai.on1287379877
Document Type :
Electronic Resource