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Development of new SNP and INDEL loci for the valuable African timber species Lophira alata

Authors :
Blanc-Jolivet, Céline
Mader, Malte
Bouda, Henri Noël
Massot, Marie
Daïnou, Kasso
Yene, Germain
Opuni-Frimpong, Emmanuel
Degen, Bernd
Blanc-Jolivet, Céline
Mader, Malte
Bouda, Henri Noël
Massot, Marie
Daïnou, Kasso
Yene, Germain
Opuni-Frimpong, Emmanuel
Degen, Bernd
Source :
Conservation genetics resources
Publication Year :
2020

Abstract

The timber of the species Lophira alata (azobe) is very popular for outdoor constructions, which favours its overexploitation and illegal logging. We sampled individuals from Liberia, Ivory Coast, Ghana, Nigeria, Cameroon, Gabon, Congo Brazzaville and Republic Democratic of Congo to discover new nuclear and plastidial SNP and INDEL loci through restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing. From an initial set of 397 loci, a final set of 126 loci was selected for timber tracking purposes.<br />SCOPUS: ar.j<br />info:eu-repo/semantics/published

Details

Database :
OAIster
Journal :
Conservation genetics resources
Notes :
1 full-text file(s): application/pdf, English
Publication Type :
Electronic Resource
Accession number :
edsoai.on1258100578
Document Type :
Electronic Resource