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A comprehensive enhancer screen identifies TRAM2 as a key and novel mediator of YAP oncogenesis

Authors :
Li, L. (Li)
Ugalde, A.P. (Alejandro)
Scheele, C.L.G.J. (Colinda L. G. J.)
Dieter, S.M. (Sebastian M.)
Nagel, C.R. (Remco)
Ma, J. (Jin)
Pataskar, A. (Abhijeet)
Korkmaz, G. (Gozde)
Elkon, R. (Ran)
Chien, M.-P. (Miao-Ping)
You, L. (Li)
Su, P.-R. (Pin-Rui)
Bleijerveld, O.B. (Onno)
Altelaar, M. (Maarten)
Momchev, L. (Lyubomir)
Manber, Z. (Zohar)
Han, R. (Ruiqi)
Van Breugel, P.C. (Pieter C.)
Lopes, R.F.M. (Rui)
Dijke, P. (Peter) ten
van Rheenen, J. (Jacco)
Agami, R. (Reuven)
Li, L. (Li)
Ugalde, A.P. (Alejandro)
Scheele, C.L.G.J. (Colinda L. G. J.)
Dieter, S.M. (Sebastian M.)
Nagel, C.R. (Remco)
Ma, J. (Jin)
Pataskar, A. (Abhijeet)
Korkmaz, G. (Gozde)
Elkon, R. (Ran)
Chien, M.-P. (Miao-Ping)
You, L. (Li)
Su, P.-R. (Pin-Rui)
Bleijerveld, O.B. (Onno)
Altelaar, M. (Maarten)
Momchev, L. (Lyubomir)
Manber, Z. (Zohar)
Han, R. (Ruiqi)
Van Breugel, P.C. (Pieter C.)
Lopes, R.F.M. (Rui)
Dijke, P. (Peter) ten
van Rheenen, J. (Jacco)
Agami, R. (Reuven)
Publication Year :
2021

Abstract

Background: Frequent activation of the co-transcriptional factor YAP is observed in a large number of solid tumors. Activated YAP associates with enhancer loci via TEAD4-DNA-binding protein and stimulates cancer aggressiveness. Although thousands of YAP/TEAD4 binding-sites are annotated, their functional importance is unknown. Here, we aim at further identification of enhancer elements that are required for YAP functions. Results: We first apply genome-wide ChIP profiling of YAP to systematically identify enhancers that are bound by YAP/TEAD4. Next, we implement a genetic approach to uncover functions of YAP/TEAD4-associated enhancers, demonstrate its robustness, and use it to reveal a network of enhancers required for YAP-mediated proliferation. We focus on EnhancerTRAM2, as its target gene TRAM2 shows the strongest expression-correlation with YAP activity in nearly all tumor types. Interestingly, TRAM2 phenocopie

Details

Database :
OAIster
Notes :
application/pdf, Genome Biology vol. 22 no. 1, English
Publication Type :
Electronic Resource
Accession number :
edsoai.on1244879666
Document Type :
Electronic Resource
Full Text :
https://doi.org/10.1186.s13059-021-02272-8