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Improved Sampling in Ab Initio Free Energy Calculations of Biomolecules at Solid-Liquid Interfaces : Tight-Binding Assessment of Charged Amino Acids on TiO2 Anatase (101)

Authors :
Agosta, Lorenzo
Brandt, Erik G.
Lyubartsev, Alexander
Agosta, Lorenzo
Brandt, Erik G.
Lyubartsev, Alexander
Publication Year :
2020

Abstract

Atomistic simulations can complement the scarce experimental data on free energies of molecules at bio-inorganic interfaces. In molecular simulations, adsorption free energy landscapes are efficiently explored with advanced sampling methods, but classical dynamics is unable to capture charge transfer and polarization at the solid-liquid interface. Ab initio simulations do not suffer from this flaw, but only at the expense of an overwhelming computational cost. Here, we introduce a protocol for adsorption free energy calculations that improves sampling on the timescales relevant to ab initio simulations. As a case study, we calculate adsorption free energies of the charged amino acids Lysine and Aspartate on the fully hydrated anatase (101) TiO2 surface using tight-binding forces. We find that the first-principle description of the system significantly contributes to the adsorption free energies, which is overlooked by calculations with previous methods.

Details

Database :
OAIster
Notes :
application/pdf, English
Publication Type :
Electronic Resource
Accession number :
edsoai.on1234258992
Document Type :
Electronic Resource
Full Text :
https://doi.org/10.3390.computation8010012