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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

Authors :
Bowers, Robert M.
Kyrpides, Nikos C.
Stepanauskas, Ramunas
Harmon-Smith, Miranda
Doud, Devin
Reddy, T. B. K.
Schulz, Frederik
Jarett, Jessica
Rivers, Adam R.
Eloe-Fadrosh, Emiley A.
Tringe, Susannah G.
Ivanova, Natalia N.
Copeland, Alex
Clum, Alicia
Becraft, Eric D.
Malmstrom, Rex R.
Birren, Bruce
Podar, Mircea
Bork, Peer
Weinstock, George M.
Garrity, George M.
Dodsworth, Jeremy A.
Yooseph, Shibu
Sutton, Granger
Gloeckner, Frank O.
Gilbert, Jack A.
Nelson, William C.
Hallam, Steven J.
Jungbluth, Sean P.
Ettema, Thijs J. G.
Tighe, Scott
Konstantinidis, Konstantinos T.
Liu, Wen-Tso
Baker, Brett J.
Rattei, Thomas
Eisen, Jonathan A.
Hedlund, Brian
McMahon, Katherine D.
Fierer, Noah
Knight, Rob
Finn, Rob
Cochrane, Guy
Karsch-Mizrachi, Ilene
Tyson, Gene W.
Rinke, Christian
Lapidus, Alla
Meyer, Folker
Yilmaz, Pelin
Parks, Donovan H.
Eren, A. M.
Schriml, Lynn
Banfield, Jillian F.
Hugenholtz, Philip
Woyke, Tanja
Bowers, Robert M.
Kyrpides, Nikos C.
Stepanauskas, Ramunas
Harmon-Smith, Miranda
Doud, Devin
Reddy, T. B. K.
Schulz, Frederik
Jarett, Jessica
Rivers, Adam R.
Eloe-Fadrosh, Emiley A.
Tringe, Susannah G.
Ivanova, Natalia N.
Copeland, Alex
Clum, Alicia
Becraft, Eric D.
Malmstrom, Rex R.
Birren, Bruce
Podar, Mircea
Bork, Peer
Weinstock, George M.
Garrity, George M.
Dodsworth, Jeremy A.
Yooseph, Shibu
Sutton, Granger
Gloeckner, Frank O.
Gilbert, Jack A.
Nelson, William C.
Hallam, Steven J.
Jungbluth, Sean P.
Ettema, Thijs J. G.
Tighe, Scott
Konstantinidis, Konstantinos T.
Liu, Wen-Tso
Baker, Brett J.
Rattei, Thomas
Eisen, Jonathan A.
Hedlund, Brian
McMahon, Katherine D.
Fierer, Noah
Knight, Rob
Finn, Rob
Cochrane, Guy
Karsch-Mizrachi, Ilene
Tyson, Gene W.
Rinke, Christian
Lapidus, Alla
Meyer, Folker
Yilmaz, Pelin
Parks, Donovan H.
Eren, A. M.
Schriml, Lynn
Banfield, Jillian F.
Hugenholtz, Philip
Woyke, Tanja
Publication Year :
2017

Abstract

We present two standards developed by the Genomic Standards Consortium (GSC) for reporting bacterial and archaeal genome sequences. Both are extensions of the Minimum Information about Any (x) Sequence (MIxS). The standards are the Minimum Information about a Single Amplified Genome (MISAG) and the Minimum Information about a Metagenome-Assembled Genome (MIMAG), including, but not limited to, assembly quality, and estimates of genome completeness and contamination. These standards can be used in combination with other GSC checklists, including the Minimum Information about a Genome Sequence (MIGS), Minimum Information about a Metagenomic Sequence (MIMS), and Minimum Information about a Marker Gene Sequence (MIMARKS). Community-wide adoption of MISAG and MIMAG will facilitate more robust comparative genomic analyses of bacterial and archaeal diversity.

Details

Database :
OAIster
Notes :
application/pdf, English
Publication Type :
Electronic Resource
Accession number :
edsoai.on1233364174
Document Type :
Electronic Resource
Full Text :
https://doi.org/10.1038.nbt.3893