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Sensitive mutation detection in heterogeneous cancer specimens by massively parallel picoliter reactor sequencing

Authors :
Thomas, Roman K
Nickerson, Elizabeth
Simons, Jan F
Janne, Pasi A
Tengs, Torstein
Yuza, Yuki
Garraway, Levi A
LaFramboise, Thomas
Lee, Jeffrey C
Shah, Kinjal
O'Neill, Keith
Sasaki, Hidefumi
Lindeman, Neal
Wong, Kwok-Kin
Borras, Ana M
Gutmann, Edward J
Dragnev, Konstantin H
DeBiasi, Ralph
Chen, Tzu-Hsiu
Glatt, Karen A
Greulich, Heidi
Desany, Brian
Lubeski, Christine K
Brockman, William
Alvarez, Pablo
Hutchison, Stephen K
Leamon, J H
Ronan, Michael T
Turenchalk, Gregory S
Egholm, Michael
Sellers, William R
Rothberg, Jonathan M
Meyerson, Matthew
Source :
Nature Medicine. July, 2006, Vol. 12 Issue 7, p852, 4 p.
Publication Year :
2006

Abstract

The sensitivity of conventional DNA sequencing in tumor biopsies is limited by stromal contamination and by genetic heterogeneity within the cancer. Here, we show that microreactor-based pyrosequencing can detect rare cancer-associated sequence variations by independent and parallel sampling of multiple representatives of a given DNA fragment. This technology can thereby facilitate accurate molecular diagnosis of heterogeneous cancer specimens and enable patient selection for targeted cancer therapies. NOTE:: In the version of this article initially published, it should have been acknowledged that Jan F. Simons, in addition to Roman K. Thomas and Elizabeth Nickerson, contributed equally to this work. The error has been corrected in the HTML and PDF versions of the article.<br />Author(s): Roman K Thomas [1, 2, 12]; Elizabeth Nickerson [3, 12]; Jan F Simons [3, 11, 12]; Pasi A Janne [1]; Torstein Tengs [1, 2]; Yuki Yuza [1]; Levi A [...]

Details

Language :
English
ISSN :
10788956
Volume :
12
Issue :
7
Database :
Gale General OneFile
Journal :
Nature Medicine
Publication Type :
Academic Journal
Accession number :
edsgcl.192623560
Full Text :
https://doi.org/10.1038/nm1437