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Towards accurate ab inito QM/MM calculations of free-energy profiles of enzymatic reactions

Authors :
Rosta, Edina
Klahn, Marco
Warshel, Arieh
Source :
Journal of Physical Chemistry B. Feb 16, 2006, Vol. 110 Issue 6, p2934, 8 p.
Publication Year :
2006

Abstract

The evaluation of ab inito QM/MM free-energy surfaces and activation free energies of reactions in enzymes and in solutions is carried out by using the empirical valence bond (EVB) method as a reference potential and then using linear response approximation (LRA). This new method evaluates the free energy associated with both the substrate and the solvent and helps in obtaining a free-energy barrier that reflects the solute entropy properly.

Details

Language :
English
ISSN :
15206106
Volume :
110
Issue :
6
Database :
Gale General OneFile
Journal :
Journal of Physical Chemistry B
Publication Type :
Academic Journal
Accession number :
edsgcl.144906802