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A protocol for extraction of total RNA from finger stick whole blood samples preserved with Tempus TM solution [version 1; peer review: 2 approved with reservations]

Authors :
Basirudeen Syed Ahamed Kabeer
Sara Tomei
Valentina Mattei
Tobias Brummaier
Rose McGready
Francois Nosten
Damien Chaussabel
Author Affiliations :
<relatesTo>1</relatesTo>Sidra Medicine, Doha, Qatar<br /><relatesTo>2</relatesTo>Shoklo Malaria Research Unit, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Mae Sot, Thailand<br /><relatesTo>3</relatesTo>Department of Medicine, Swiss Tropical and Public Health Institute,, Basel, Switzerland<br /><relatesTo>4</relatesTo>Faculty of Medicine, University of Basel, Basel, Switzerland<br /><relatesTo>5</relatesTo>Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Source :
F1000Research. 7:1739
Publication Year :
2018
Publisher :
London, UK: F1000 Research Limited, 2018.

Abstract

Monitoring of blood transcriptional changes during disease or treatment could improve the understanding of cellular mechanisms associated with that particular condition. This can be achieved through serial sampling of small blood volumes. However, molecular analysis of gene expression from low volume samples remains a challenging task. To address this issue, we have developed a set of standard operating procedures (SOP), starting from collection of small volume blood to measurement of gene expression. Previously we published an SOP for the collection of a small volume of blood via finger stick and stabilization of RNA. The aim of this manuscript is to share a modified Tempus TM solution based RNA extraction method, developed in our lab, for the extraction of total RNA from low volume whole blood samples collected via finger stick.

Details

ISSN :
20461402
Volume :
7
Database :
F1000Research
Journal :
F1000Research
Notes :
[version 1; peer review: 2 approved with reservations]
Publication Type :
Academic Journal
Accession number :
edsfor.10.12688.f1000research.16622.1
Document Type :
research-note
Full Text :
https://doi.org/10.12688/f1000research.16622.1