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Investigations on microbial diversity of Jakrem hot spring, Meghalaya, India using cultivation-independent approach

Authors :
Amrita Kumari Panda
Satpal Singh Bisht
Nachimuthu Senthil Kumar
Surajit De Mandal
Source :
Genomics Data, Vol 4, Iss C, Pp 156-157 (2015)
Publication Year :
2015
Publisher :
Elsevier, 2015.

Abstract

Jakrem hot water spring is located in the West Khasi Hill District of the state of Meghalaya, and is one of the most popular hot springs of the state. There is a populist belief among the inhabitants and people that the hot spring water has got curative properties against various skin ailments. This is the first report on V3 hyper-variable region of 16S rDNA metagenome sequence employing Illumina platform to profile the microbial community of this less known hot spring from Meghalaya, India. Metagenome comprised of 10, 74,120 raw sequences with a sequence length of 151 bp and 56.35% G + C content. Metagenome sequence information is now available at NCBI, SRA database accession no. SRP056897. A total of 8, 77, 364 pre-processed reads were clustered into 694 OTUs (operational taxonomical units) comprising of 14 bacterial phyla including unknown phylum demonstrating 49 families. Hot spring bacterial community is dominated by Firmicutes (61.60%), Chloroflexi (21.37%), Cyanobacteria (12.96%) and unclassified bacteria (1.2%) respectively.

Details

Language :
English
ISSN :
22135960
Volume :
4
Issue :
C
Database :
Directory of Open Access Journals
Journal :
Genomics Data
Publication Type :
Academic Journal
Accession number :
edsdoj.f9f5acfec42042caa769fe65cc4219fd
Document Type :
article
Full Text :
https://doi.org/10.1016/j.gdata.2015.04.016