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A reference quality, fully annotated diploid genome from a Saudi individual

Authors :
Maxat Kulmanov
Rund Tawfiq
Yang Liu
Hatoon Al Ali
Marwa Abdelhakim
Mohammed Alarawi
Hind Aldakhil
Dana Alhattab
Ebtehal A. Alsolme
Azza Althagafi
Angel Angelov
Salim Bougouffa
Patrick Driguez
Changsook Park
Alexander Putra
Ana M. Reyes-Ramos
Charlotte A. E. Hauser
Ming Sin Cheung
Malak S. Abedalthagafi
Robert Hoehndorf
Source :
Scientific Data, Vol 11, Iss 1, Pp 1-10 (2024)
Publication Year :
2024
Publisher :
Nature Portfolio, 2024.

Abstract

Abstract We have used multiple sequencing approaches to sequence the genome of a volunteer from Saudi Arabia. We use the resulting data to generate a de novo assembly of the genome, and use different computational approaches to refine the assembly. As a consequence, we provide a contiguous assembly of the complete genome of an individual from Saudi Arabia for all chromosomes except chromosome Y, and label this assembly KSA001. We transferred genome annotations from reference genomes to fully annotate KSA001, and we make all primary sequencing data, the assembly, and the genome annotations freely available in public databases using the FAIR data principles. KSA001 is the first telomere-to-telomere-assembled genome from a Saudi individual that is freely available for any purpose.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20524463
Volume :
11
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Scientific Data
Publication Type :
Academic Journal
Accession number :
edsdoj.f8c410b3ea39416aa36bd21f45b9d54d
Document Type :
article
Full Text :
https://doi.org/10.1038/s41597-024-04121-2