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Computational detection of a genome instability‐derived lncRNA signature for predicting the clinical outcome of lung adenocarcinoma

Authors :
Chen‐Rui Guo
Yan Mao
Feng Jiang
Chen‐Xia Juan
Guo‐Ping Zhou
Ning Li
Source :
Cancer Medicine, Vol 11, Iss 3, Pp 864-879 (2022)
Publication Year :
2022
Publisher :
Wiley, 2022.

Abstract

Abstract Evidence has been emerging of the importance of long non‐coding RNAs (lncRNAs) in genome instability. However, no study has established how to classify such lncRNAs linked to genomic instability, and whether that connection poses a therapeutic significance. Here, we established a computational frame derived from mutator hypothesis by combining profiles of lncRNA expression and those of somatic mutations in a tumor genome, and identified 185 candidate lncRNAs associated with genomic instability in lung adenocarcinoma (LUAD). Through further studies, we established a six lncRNA‐based signature, which assigned patients to the high‐ and low‐risk groups with different prognosis. Further validation of this signature was performed in a number of separate cohorts of LUAD patients. In addition, the signature was found closely linked to genomic mutation rates in patients, indicating it could be a useful way to quantify genomic instability. In summary, this research offered a novel method by through which more studies may explore the function of lncRNAs and presented a possible new way for detecting biomarkers associated with genomic instability in cancers.

Details

Language :
English
ISSN :
20457634
Volume :
11
Issue :
3
Database :
Directory of Open Access Journals
Journal :
Cancer Medicine
Publication Type :
Academic Journal
Accession number :
edsdoj.f756180eea4f4dc88582f9f1c8ad1cfe
Document Type :
article
Full Text :
https://doi.org/10.1002/cam4.4471