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Phasing analysis of lung cancer genomes using a long read sequencer

Authors :
Yoshitaka Sakamoto
Shuhei Miyake
Miho Oka
Akinori Kanai
Yosuke Kawai
Satoi Nagasawa
Yuichi Shiraishi
Katsushi Tokunaga
Takashi Kohno
Masahide Seki
Yutaka Suzuki
Ayako Suzuki
Source :
Nature Communications, Vol 13, Iss 1, Pp 1-17 (2022)
Publication Year :
2022
Publisher :
Nature Portfolio, 2022.

Abstract

Long-read sequencing technologies are useful for the multifaceted task of characterising somatic mutations, including structural variants, in cancers. Here, the authors combine short and long read sequencing for the phasing analysis, which enables them to resolve the chromosomal backgrounds of somatic mutations in Japanese non-small cell lung cancers.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
13
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.f517305d9bd44c789127c73bfeec27a9
Document Type :
article
Full Text :
https://doi.org/10.1038/s41467-022-31133-6