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The stoichiometry of metabolic pathways in the dynamics of cellular populations

Authors :
Igor’ Georgievich Minkevich
Source :
Компьютерные исследования и моделирование, Vol 3, Iss 4, Pp 455-475 (2011)
Publication Year :
2011
Publisher :
Institute of Computer Science, 2011.

Abstract

The problem has been considered, to what extent the kinetic models of cellular metabolism fit the matter which they describe. Foundations of stoichiometry of the whole metabolism and its large regions have been stated. A bioenergetic representation of stoichiometry based on a universal unit of chemical compound reductivity, viz., redoxon, has been described. Equations of mass-energy balance (bioenergetic variant of stoichiometry) have been derived for metabolic flows including those of protons possessing high electrochemical potential H+, and high-energy compounds. Interrelations have been obtained which determine the biomass yield, rate of uptake of energy source for cell growth and other important physiological quantities as functions of biochemical characteristics of cellular energetics. The maximum biomass energy yield values have been calculated for different energy sources utilized by cells. These values coincide with those measured experimentally.

Details

Language :
Russian
ISSN :
20767633 and 20776853
Volume :
3
Issue :
4
Database :
Directory of Open Access Journals
Journal :
Компьютерные исследования и моделирование
Publication Type :
Academic Journal
Accession number :
edsdoj.f2da2ecd7f504c5b80a9a05ace4557ea
Document Type :
article
Full Text :
https://doi.org/10.20537/2076-7633-2011-3-4-455-475