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Parallelized multidimensional analytic framework applied to mammary epithelial cells uncovers regulatory principles in EMT

Authors :
Indranil Paul
Dante Bolzan
Ahmed Youssef
Keith A. Gagnon
Heather Hook
Gopal Karemore
Michael U. J. Oliphant
Weiwei Lin
Qian Liu
Sadhna Phanse
Carl White
Dzmitry Padhorny
Sergei Kotelnikov
Christopher S. Chen
Pingzhao Hu
Gerald V. Denis
Dima Kozakov
Brian Raught
Trevor Siggers
Stefan Wuchty
Senthil K. Muthuswamy
Andrew Emili
Source :
Nature Communications, Vol 14, Iss 1, Pp 1-23 (2023)
Publication Year :
2023
Publisher :
Nature Portfolio, 2023.

Abstract

Epithelial-to-mesenchymal transition (EMT) is a complex process regulated at multiple molecular levels. Here, the authors implement an analytic framework - PAMAF - to integrate data from twelve distinct omics modalities, which they use to understand the molecular changes and regulation during EMT in vitro.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
14
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.f07b77169d2c404490c225320410df32
Document Type :
article
Full Text :
https://doi.org/10.1038/s41467-023-36122-x