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A telomere-to-telomere genome assembly of Hongyingzi, a sorghum cultivar used for Chinese Baijiu production

Authors :
Yanqing Ding
Yilin Wang
Jianxia Xu
Feng Jiang
Wenzhen Li
Qiaoling Zhang
Longping Yang
Zhenyu Zhao
Bin Cheng
Ning Cao
Xu Gao
Xin Zhang
Guihua Zou
Fan Yang
Liyi Zhang
Source :
Crop Journal, Vol 12, Iss 2, Pp 635-640 (2024)
Publication Year :
2024
Publisher :
KeAi Communications Co., Ltd., 2024.

Abstract

Sorghum (Sorghum bicolor (L.) Moench) is a world cereal crop used in China for producing Baijiu, a distilled spirit. We report a telomere-to-telomere genome assembly of the Baijiu cultivar Hongyingzi, HYZ-T2T, using ultralong reads. The 10 chromosome pairs contained 33,462 genes, of which 93% were functionally annotated. The 20 telomeres and 10 centromeric regions on the HYZ-T2T chromosomes were predicted and two consecutive large inversions on chromosome 2 were characterized. A 65-gene reconstruction of the metabolic pathway of tannins, the flavor substances in Baijiu, was performed and may advance the breeding of sorghum cultivars for Baijiu production.

Details

Language :
English
ISSN :
22145141
Volume :
12
Issue :
2
Database :
Directory of Open Access Journals
Journal :
Crop Journal
Publication Type :
Academic Journal
Accession number :
edsdoj.b9a413e0a1dc41cc975f92aca485f5c5
Document Type :
article
Full Text :
https://doi.org/10.1016/j.cj.2024.02.011