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Genome-wide analysis of HSP70 family genes in cabbage (Brassica oleracea var. capitata) reveals their involvement in floral development

Authors :
Henan Su
Miaomiao Xing
Xing Liu
Zhiyuan Fang
Limei Yang
Mu Zhuang
Yangyong Zhang
Yong Wang
Honghao Lv
Source :
BMC Genomics, Vol 20, Iss 1, Pp 1-14 (2019)
Publication Year :
2019
Publisher :
BMC, 2019.

Abstract

Abstract Background Heat shock proteins have important functions in regulating plant growth and response to abiotic stress. HSP70 family genes have been described in several plant species, but a comprehensive analysis of the HSP70 family genes in cabbage has not been reported to date, especially their roles in floral development. Results In this study, we identified 52 BoHSP70 genes in cabbage. The gene structures, motifs, and chromosome locations of the BoHSP70 genes were analyzed. The genes were divided into seven classes using a phylogenetic analysis. An expression analysis showed that the BoHSP70 genes were highly expressed in actively growing tissues, including buds and calluses. In addition, six BoHSP70 genes were highly expressed in the binuclear-pollen-stage buds of a male fertile line compared with its near isogenic sterile line. These results were further verified using qRT-PCR. Subcellular localization analysis of the bud-specific gene BoHSP70–5 showed that it was localized in the cytoplasm. Conclusions Our results help to elucidate the involvement of the BoHSP70 family genes in cabbage floral development and establish the groundwork for future research on the functions of these genes.

Details

Language :
English
ISSN :
14712164
Volume :
20
Issue :
1
Database :
Directory of Open Access Journals
Journal :
BMC Genomics
Publication Type :
Academic Journal
Accession number :
edsdoj.b961ab76800a47d7a0d32e7ce061cf71
Document Type :
article
Full Text :
https://doi.org/10.1186/s12864-019-5757-3