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Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life

Authors :
Frédéric Rimet
Eva Aylagas
Angel Borja
Agnès Bouchez
Alexis Canino
Christian Chauvin
Teofana Chonova
Fedor Ciampor Jr
Filipe О. Costa
Benoit J. D. Ferrari
Romain Gastineau
Chloé Goulon
Muriel Gugger
Maria Holzmann
Regine Jahn
Maria Kahlert
Wolf-Henning Kusber
Christophe Laplace-Treyture
Florian Leese
Frederik Leliaert
David G. Mann
Frédéric Marchand
Vona Méléder
Jan Pawlowski
Serena Rasconi
Sinziana Rivera
Rodolphe Rougerie
Magali Schweizer
Rosa Trobajo
Valentin Vasselon
Régis Vivien
Alexander Weigand
Andrzej Witkowski
Jonas Zimmermann
Torbjørn Ekrem
Source :
Metabarcoding and Metagenomics, Vol 5, Iss , Pp 17-33 (2021)
Publication Year :
2021
Publisher :
Pensoft Publishers, 2021.

Abstract

DNA barcoding and metabarcoding is increasingly used to effectively and precisely assess and monitor biodiversity in aquatic ecosystems. As these methods rely on data availability and quality of barcode reference libraries, it is important to develop and follow best practices to ensure optimal quality and traceability of the metadata associated with the reference barcodes used for identification. Sufficient metadata, as well as vouchers, corresponding to each reference barcode must be available to ensure reliable barcode library curation and, thereby, provide trustworthy baselines for downstream molecular species identification. This document (1) specifies the data and metadata required to ensure the relevance, the accessibility and traceability of DNA barcodes and (2) specifies the recommendations for DNA harvesting and for the storage of both voucher specimens/samples and barcode data.

Subjects

Subjects :
Ecology
QH540-549.5

Details

Language :
English
ISSN :
25349708
Volume :
5
Issue :
17-33
Database :
Directory of Open Access Journals
Journal :
Metabarcoding and Metagenomics
Publication Type :
Academic Journal
Accession number :
edsdoj.b06918e2c9d848f08bcd15e086c02d2b
Document Type :
article
Full Text :
https://doi.org/10.3897/mbmg.5.58056