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Chromosome-level genome assembly of Platycarya strobilacea

Authors :
Huijuan Zhou
Xuedong Zhang
Hengzhao Liu
jiayu Ma
Fan Hao
Hang Ye
Yaling Wang
Shuoxin Zhang
Ming Yue
Peng Zhao
Source :
Scientific Data, Vol 11, Iss 1, Pp 1-10 (2024)
Publication Year :
2024
Publisher :
Nature Portfolio, 2024.

Abstract

Abstract Platycarya strobilacea belongs to the walnut family (Juglandaceae), is commonly known as species endemic to East Asia, and is an ecologically important, wind pollinated, woody deciduous tree. To facilitate this ancient tree for the ecological value and conservation of this ancient tree, we report a new high-quality genome assembly of P. strobilacea. The genome size was 677.30 Mb, with a scaffold N50 size of 45,791,698 bp, and 98.43% of the assembly was anchored to 15 chromosomes. We annotated 32,246 protein-coding genes in the genome, of which 96.30% were functionally annotated in six databases. This new high-quality assembly of P. strobilacea provide valuable resource for the phylogenetic and evolutionary analysis of the walnut family and angiosperm.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20524463
Volume :
11
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Scientific Data
Publication Type :
Academic Journal
Accession number :
edsdoj.9b1aeb0436e468aa8b176ec0ccf3b92
Document Type :
article
Full Text :
https://doi.org/10.1038/s41597-024-03107-4