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Overexpressed KCNK1 regulates potassium channels affecting molecular mechanisms and biological pathways in bladder cancer

Authors :
Wei Zhang
Xiao-Song Chen
Ying Wei
Xiao-Min Wang
Xian-Jin Chen
Bang-Teng Chi
Lin-Qing Huang
Rong-Quan He
Zhi-Guang Huang
Qi Li
Gang Chen
Juan He
Mei Wu
Source :
European Journal of Medical Research, Vol 29, Iss 1, Pp 1-18 (2024)
Publication Year :
2024
Publisher :
BMC, 2024.

Abstract

Abstract Background This study aimed to explore the expression, molecular mechanism and its biological function of potassium two pore domain channel subfamily K member 1 (KCNK1) in bladder cancer (BC). Methods We integrated large numbers of external samples (n = 1486) to assess KCNK1 mRNA expression levels and collected in-house samples (n = 245) for immunohistochemistry (IHC) experiments to validate at the KCNK1 protein level. Single-cell RNA sequencing (scRNA-seq) analysis was performed to further assess KCNK1 expression and cellular communication. The transcriptional regulatory mechanisms of KCNK1 expression were explored by ChIP-seq, ATAC-seq and ChIA-PET data. Highly expressed co-expressed genes (HECEGs) of KCNK1 were used to explore potential signalling pathways. Furthermore, the immunoassay, clinical significance and molecular docking of KCNK1 were calculated. Results KCNK1 mRNA was significantly overexpressed in BC (SMD = 0.58, 95% CI [0.05; 1.11]), validated at the protein level (p

Details

Language :
English
ISSN :
2047783X
Volume :
29
Issue :
1
Database :
Directory of Open Access Journals
Journal :
European Journal of Medical Research
Publication Type :
Academic Journal
Accession number :
edsdoj.976fb098cf704d92a1065214459ad135
Document Type :
article
Full Text :
https://doi.org/10.1186/s40001-024-01844-1