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A seven-gene prognostic signature predicts overall survival of patients with lung adenocarcinoma (LUAD)

Authors :
Aisha Al-Dherasi
Qi-Tian Huang
Yuwei Liao
Sultan Al-Mosaib
Rulin Hua
Yichen Wang
Ying Yu
Yu Zhang
Xuehong Zhang
Chao Huang
Haithm Mousa
Dongcen Ge
Sufiyan Sufiyan
Wanting Bai
Ruimei Liu
Yanyan Shao
Yulong Li
Jingkai Zhang
Leming Shi
Dekang Lv
Zhiguang Li
Quentin Liu
Source :
Cancer Cell International, Vol 21, Iss 1, Pp 1-16 (2021)
Publication Year :
2021
Publisher :
BMC, 2021.

Abstract

Abstract Background Lung adenocarcinoma (LUAD) is one of the most common types in the world with a high mortality rate. Despite advances in treatment strategies, the overall survival (OS) remains short. Our study aims to establish a reliable prognostic signature closely related to the survival of LUAD patients that can better predict prognosis and possibly help with individual monitoring of LUAD patients. Methods Raw RNA-sequencing data were obtained from Fudan University and used as a training group. Differentially expressed genes (DEGs) for the training group were screened. The univariate, least absolute shrinkage and selection operator (LASSO), and multivariate cox regression analysis were conducted to identify the candidate prognostic genes and construct the risk score model. Kaplan–Meier analysis, time-dependent receiver operating characteristic (ROC) curve were used to evaluate the prognostic power and performance of the signature. Moreover, The Cancer Genome Atlas (TCGA-LUAD) dataset was further used to validate the predictive ability of prognostic signature. Results A prognostic signature consisting of seven prognostic-related genes was constructed using the training group. The 7-gene prognostic signature significantly grouped patients in high and low-risk groups in terms of overall survival in the training cohort [hazard ratio, HR = 8.94, 95% confidence interval (95% CI)] [2.041–39.2]; P = 0.0004), and in the validation cohort (HR = 2.41, 95% CI [1.779–3.276]; P

Details

Language :
English
ISSN :
14752867
Volume :
21
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Cancer Cell International
Publication Type :
Academic Journal
Accession number :
edsdoj.95567e414ef6441d91d3d0df21487eec
Document Type :
article
Full Text :
https://doi.org/10.1186/s12935-021-01975-z