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Dataset for homologous proteins in Drosophila melanogaster for SARS-CoV-2/human interactome

Authors :
Mushtaq Hussain
Nusrat Jabeen
Sanya Shabbir
Nasir Udin
Basma Aziz
Anusha Amanullah
Fozia Raza
Ayesha Ashraf Baig
Source :
Data in Brief, Vol 32, Iss , Pp 106082- (2020)
Publication Year :
2020
Publisher :
Elsevier, 2020.

Abstract

Animal modelling for infectious diseases is critical to understand the biology of the pathogens including viruses and to develop therapeutic strategies against it. Herein, we present the sequence homology and expression data analysis of proteins found in Drosophila melanogaster that are orthologous to human proteins, reported as components of SARS-CoV-2/Human interactome. The dataset enlists sequence homology, query coverage, domain conservation, OrthoMCL and Ensembl Genome Browser support of 326 proteins in D.melanogaster that are potentially orthologous to 417 human proteins reported for their direct physical interactions with 28 proteins encoded by SARS-CoV-2 genome. Expression of these D.melanogaster orthologous genes in 26 anatomical positions are also plotted as heat maps in 27 sets, corresponding to the potential protein interactors for each viral protein. The data could be used to direct experiments and potentially predict their phenotypic and molecular outcome in order to dissect the biological roles and molecular functionality of SARS-CoV-2 proteins in a convenient animal model system like D.melanogaster.

Details

Language :
English
ISSN :
23523409
Volume :
32
Issue :
106082-
Database :
Directory of Open Access Journals
Journal :
Data in Brief
Publication Type :
Academic Journal
Accession number :
edsdoj.94624f01a1834f92bc46bc91557d31aa
Document Type :
article
Full Text :
https://doi.org/10.1016/j.dib.2020.106082