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Hsa_circ_0004831 serves as a blood-based prognostic biomarker for colorectal cancer and its potentially circRNA-miRNA-mRNA regulatory network construction

Authors :
Linlin Xing
Mengyan Xia
Xin Jiao
Ling Fan
Source :
Cancer Cell International, Vol 20, Iss 1, Pp 1-9 (2020)
Publication Year :
2020
Publisher :
BMC, 2020.

Abstract

Abstract Background Colorectal cancer (CRC) is a common malignant tumor with unsatisfactory overall prognosis. CircRNAs could be promising prognostic biomarkers in cancers, and play important role in the process of tumorigenesis and progression. Here, we explored the role of hsa_circ_0004831 in blood extracellular vesicles and its prognostic value in CRC. Methods The circRNA and mRNA expression level matrix in extracellular vesicles of CRC and normal samples were obtained from the exoRBase database. The corresponding miRNA expression level matrix in extracellular vesicles was downloaded from the BBCancer database. Differentially expressed circRNAs, miRNAs and mRNAs were identified using the limma package of R software at the cut-off criteria of fold change (FC) > 2 and adj. p 0.3 and p

Details

Language :
English
ISSN :
14752867
Volume :
20
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Cancer Cell International
Publication Type :
Academic Journal
Accession number :
edsdoj.8d378ae4e4e24320be51a2fa67e31f29
Document Type :
article
Full Text :
https://doi.org/10.1186/s12935-020-01651-8