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Circular RNA transcriptome analysis responses to heat stress in the hypothalamus of sows

Authors :
Yifan Ni
Jianfeng Cai
Qiangqiang Chen
Fen Wu
Jinping Hu
Jinzhi Zhang
Source :
Journal of Applied Animal Research, Vol 49, Iss 1, Pp 440-446 (2021)
Publication Year :
2021
Publisher :
Taylor & Francis Group, 2021.

Abstract

Circular RNAs (circRNAs), as miRNA sponges, have been found to participate in transcriptional control and many important biological processes. Heat stress (HS) severely affects feed intake and milk production of sows. However, the expression and function of circRNAs in the hypothalamus of sows and whether they are involved in the adaptation to HS have not been explored. In this study, RNA sequencing and functional analysis were performed to explore the expression and function of circRNAs in the hypothalamus of heat-stressed sows. Toally, 38,143 circRNAs were identified from the hypothalamus of heat-stressed sows, among which 307 circRNAs (170 upregulated and 137 downregulated) were significantly differentially expressed (DE) in the HS groups compared to the control groups. Their host genes are involved in the cellular component organization or biogenesis, metabolic process, and cellular metabolic process, the MAPK signalling pathway and the TGF-β signalling pathway. And a total of 307 DE circRNAs were found to act as sponges for 457 miRNAs. This research explored the expression profiles of circRNAs in the hypothalamus of heat-stressed sows, which will provide basic data for further investigation of the biological function and the regulatory role of circRNAs in the heat-stressed sows.

Details

Language :
English
ISSN :
09712119 and 09741844
Volume :
49
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Journal of Applied Animal Research
Publication Type :
Academic Journal
Accession number :
edsdoj.88676b9b49424c47bdbe1051506f7eec
Document Type :
article
Full Text :
https://doi.org/10.1080/09712119.2021.2005070