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Draft genome sequence of Pseudomonas moraviensis strain Devor implicates metabolic versatility and bioremediation potential

Authors :
Neil T. Miller
Danny Fuller
M.B. Couger
Mark Bagazinski
Philip Boyne
Robert C. Devor
Radwa A. Hanafy
Connie Budd
Donald P. French
Wouter D. Hoff
Noha Youssef
Source :
Genomics Data, Vol 9, Iss C, Pp 154-159 (2016)
Publication Year :
2016
Publisher :
Elsevier, 2016.

Abstract

Pseudomonas moraviensis is a predominant member of soil environments. We here report on the genomic analysis of Pseudomonas moraviensis strain Devor that was isolated from a gate at Oklahoma State University, Stillwater, OK, USA. The partial genome of Pseudomonas moraviensis strain Devor consists of 6016489 bp of DNA with 5290 protein-coding genes and 66 RNA genes. This is the first detailed analysis of a P. moraviensis genome. Genomic analysis revealed metabolic versatility with genes involved in the metabolism and transport of fructose, xylose, mannose and all amino acids with the exception of tryptophan and valine, implying that the organism is a versatile heterotroph. The genome of P. moraviensis strain Devor was rich in transporters and, based on COG analysis, did not cluster closely with P. moraviensis R28-S genome, the only previous report of a P. moraviensis genome with a native mercury resistance plasmid.

Details

Language :
English
ISSN :
22135960
Volume :
9
Issue :
C
Database :
Directory of Open Access Journals
Journal :
Genomics Data
Publication Type :
Academic Journal
Accession number :
edsdoj.87144b814d924fe19cfff5d1c27a6b57
Document Type :
article
Full Text :
https://doi.org/10.1016/j.gdata.2016.08.004