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Genome sequencing and annotation of Afipia septicemium strain OHSU_II

Authors :
Philip Yang
Guo-Chiuan Hung
Haiyan Lei
Tianwei Li
Bingjie Li
Shien Tsai
Shyh-Ching Lo
Source :
Genomics Data, Vol 2, Iss C, Pp 123-126 (2014)
Publication Year :
2014
Publisher :
Elsevier, 2014.

Abstract

We report the 5.1 Mb noncontiguous draft genome of Afipia septicemium strain OHSU_II, isolated from blood of a female patient. The genome consists of 5,087,893 bp circular chromosome with no identifiable autonomous plasmid with a G + C content of 61.09% and contains 4898 protein-coding genes and 49 RNA genes including 3 rRNA genes and 46 tRNA genes.

Subjects

Subjects :
Afipia septicemium
Whole genome
Illumina-MiSeq
CLC bio Genomics Workbench version 6.0
Rapid Annotations using Subsystems Technology (RAST)
Genetics
QH426-470

Details

Language :
English
ISSN :
22135960
Volume :
2
Issue :
C
Database :
Directory of Open Access Journals
Journal :
Genomics Data
Publication Type :
Academic Journal
Accession number :
edsdoj.86c9525a7d044a378345956264470f5e
Document Type :
article
Full Text :
https://doi.org/10.1016/j.gdata.2014.06.001
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