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Characterization of the whole plastid genome sequence of Abies chensiensis (Pinaceae), an endangered endemic conifer in China

Authors :
Mi-Li Liu
Ji-Qing Bai
Wan-Lin Dong
Ruo-Nan Wang
Peng-Bin Dong
Ning- Wang
Hong-Yan Liu
Min-Feng Fang
Source :
Mitochondrial DNA. Part B. Resources, Vol 3, Iss 2, Pp 1141-1142 (2018)
Publication Year :
2018
Publisher :
Taylor & Francis Group, 2018.

Abstract

Abies chensiensis Van Tiegh. (Pinaceae) is a rare and endangered endemic conifer in China. In this study, using the Illumina sequencing platform, we firstly characterized its whole plastid genome sequence. Our study revealed that A. chensiensis have a typical plastid genome of 121,498 bp in length, comprised of a large single copy region of 76,484 bp, a small single copy region of 42,654 bp and two inverted repeat regions of 1180 bp. A total of 113 genes, 74 protein-coding genes, 35 tRNA, and 4 rRNA genes were identified. The phylogenetic analysis indicated that A. chensiensis was placed as a sister to the congeneric A. sibirica.

Details

Language :
English
ISSN :
23802359
Volume :
3
Issue :
2
Database :
Directory of Open Access Journals
Journal :
Mitochondrial DNA. Part B. Resources
Publication Type :
Academic Journal
Accession number :
edsdoj.806573eb638144c6922919fc379e4715
Document Type :
article
Full Text :
https://doi.org/10.1080/23802359.2018.1521312