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Characterization of the whole plastid genome sequence of Abies chensiensis (Pinaceae), an endangered endemic conifer in China
- Source :
- Mitochondrial DNA. Part B. Resources, Vol 3, Iss 2, Pp 1141-1142 (2018)
- Publication Year :
- 2018
- Publisher :
- Taylor & Francis Group, 2018.
-
Abstract
- Abies chensiensis Van Tiegh. (Pinaceae) is a rare and endangered endemic conifer in China. In this study, using the Illumina sequencing platform, we firstly characterized its whole plastid genome sequence. Our study revealed that A. chensiensis have a typical plastid genome of 121,498 bp in length, comprised of a large single copy region of 76,484 bp, a small single copy region of 42,654 bp and two inverted repeat regions of 1180 bp. A total of 113 genes, 74 protein-coding genes, 35 tRNA, and 4 rRNA genes were identified. The phylogenetic analysis indicated that A. chensiensis was placed as a sister to the congeneric A. sibirica.
- Subjects :
- abies chensiensis
plastid genome
phylogenetic analysis
Genetics
QH426-470
Subjects
Details
- Language :
- English
- ISSN :
- 23802359
- Volume :
- 3
- Issue :
- 2
- Database :
- Directory of Open Access Journals
- Journal :
- Mitochondrial DNA. Part B. Resources
- Publication Type :
- Academic Journal
- Accession number :
- edsdoj.806573eb638144c6922919fc379e4715
- Document Type :
- article
- Full Text :
- https://doi.org/10.1080/23802359.2018.1521312