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Genome sequencing reveals the potential of an indigenous arsenotrophic bacterium; Achromobacter sp. KAs 3-5 for sub-surface arsenic mobilization and strategies for bioremediation
- Source :
- Canadian Journal of Biotechnology, Vol 1, Iss Special Issue-Supplement, Pp 271-271 (2017)
- Publication Year :
- 2017
- Publisher :
- Science Planet Inc., 2017.
-
Abstract
- Prevalence of toxic arsenic (As) oxyanion species in oligotrophic groundwater of south-east Asiatic regions (India and Bangladesh) has threatened the health of millions of people. As-transforming bacteria alter the mobility, speciation and bioavailability of As in the aquifer ecosystem, hence play important roles in the biogeochemical cycling of As. Till date, only 19 cultivable As-transforming bacterial strains have been reported but with no description on their detail genomic and physiological perspective of As homeostasis. In this study, the draft genome (5.7 Mbp) of an As-transforming, aromatic hydrocarbon utilizing and iron disproportioning indigenous groundwater bacterium KAs 3-5 has been obtained by Ion-Torrent sequencing revealed 65% genomic GC content, 5100 protein coding genes, and taxonomic affiliation to the members of genus Achromobacter, with >85% of genomic completeness. Phylogenomic signatures like MLST of 10 house-keeping genes, cut-off of
- Subjects :
- Biotechnology
TP248.13-248.65
Subjects
Details
- Language :
- English
- ISSN :
- 25608304
- Volume :
- 1
- Issue :
- Special Issue-Supplement
- Database :
- Directory of Open Access Journals
- Journal :
- Canadian Journal of Biotechnology
- Publication Type :
- Academic Journal
- Accession number :
- edsdoj.7e99c646f7ab4c39abd1dc2d10bec339
- Document Type :
- article
- Full Text :
- https://doi.org/10.24870/cjb.2017-a255