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The complete chloroplast genome sequence of Rosa pricei (Rosaceae)
- Source :
- Mitochondrial DNA. Part B. Resources, Vol 4, Iss 1, Pp 1918-1919 (2019)
- Publication Year :
- 2019
- Publisher :
- Taylor & Francis Group, 2019.
-
Abstract
- The complete chloroplast (cp) genome of Rosa pricei Hayata has been characterized by reference-based assembly using Illumina paired-end data. The complete cp genome is 156,599 base pairs (bp) in length, containing a large single-copy region (LSC) of 85,732 bp, a small single-copy region (SSC) of 18,749 bp, which are separated by a pair of inverted repeat regions (IRs) of 26,059 bp, a total of 139 genes were predicted from the chloroplast genome, including 87 protein-coding genes, 39 tRNA genes, and eight rRNA genes (four rRNA species). Most genes occur as a single copy while 19 gene species are duplicated. Phylogenetic analysis revealed that R. pricei was resolved as sister to R. multiflora, R. lucieae, and R. maximowicziana.
- Subjects :
- rosa pricei
chloroplast genome
phylogenetic analyses
Genetics
QH426-470
Subjects
Details
- Language :
- English
- ISSN :
- 23802359
- Volume :
- 4
- Issue :
- 1
- Database :
- Directory of Open Access Journals
- Journal :
- Mitochondrial DNA. Part B. Resources
- Publication Type :
- Academic Journal
- Accession number :
- edsdoj.79abdcc7bc034e71a7b8f850e7579b45
- Document Type :
- article
- Full Text :
- https://doi.org/10.1080/23802359.2019.1611394