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Characterization of the complete chloroplast genome of Sanicula rubriflora F. Schmidt ex Maxim
- Source :
- Mitochondrial DNA. Part B. Resources, Vol 6, Iss 7, Pp 1999-2000 (2021)
- Publication Year :
- 2021
- Publisher :
- Taylor & Francis Group, 2021.
-
Abstract
- Sanicula rubriflora refers to a kind of edible wild herbs, which possesses reputed medicinal value. Chloroplasts (cp) is essential organelle in plant cells and has a genome that can be inherited autonomously. The complete chloroplast genome of S. rubriflora was assemble and annotated in the present study. It was a circular molecular genome with a size of 155,700 bp in length, which has a typical quadripartite structure. For instance, a large single-copy (LSC) of 85,979 bp and a pair of inverted repeats (IRs) of 26,333 bp were disconnected by a small single-copy (SSC) of 17,053bp. A total of 130 genes have been annotated, including 86 protein-coding genes (PCGs), 36 transfer RNA genes (tRNAs) and 8 ribosomal RNA genes (rRNAs). The total GC content of the complete chloroplast genome reached 37.9%. A maximum likelihood phylogenetic analysis with the reported chloroplast genomes revealed that S. rubriflora is most closely related to Saniculachinensis in the phylogenetic relationships.
- Subjects :
- sanicula rubriflora
complete chloroplast genome
phylogeny
apiaceae
Genetics
QH426-470
Subjects
Details
- Language :
- English
- ISSN :
- 23802359
- Volume :
- 6
- Issue :
- 7
- Database :
- Directory of Open Access Journals
- Journal :
- Mitochondrial DNA. Part B. Resources
- Publication Type :
- Academic Journal
- Accession number :
- edsdoj.769b672fb61047399edcfe48a6efa416
- Document Type :
- article
- Full Text :
- https://doi.org/10.1080/23802359.2021.1938728