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Evolution of Antibiotic Synthesis Gene Clusters in the Streptomyces globisporus TFH56, Isolated from Tomato Flower

Authors :
Gyeongjun Cho
Youn-Sig Kwak
Source :
G3: Genes, Genomes, Genetics, Vol 9, Iss 6, Pp 1807-1813 (2019)
Publication Year :
2019
Publisher :
Oxford University Press, 2019.

Abstract

Streptomyces species are known to produce various bioactive metabolites that can prevent plant diseases. Previously, the Streptomyces strain TFH56 was found to inhibit the gray mold pathogen, Botrytis cinerea, in tomato flower. In this study, the genome sequence of strain TFH56 was acquired using the Pacific Biosciences RS II platform. Three linear sequences (7.67 Mbp in total) were obtained. Based on average nucleotide identity, strain TFH56 was classified as Streptomyces globisporus, which is consistent with the presence of a linear chromosome and linear plasmids. Moreover, as with other examples of S. globisporus, the genome of strain TFH56 included a caryolan-1-ol synthase gene, a conprimycin synthetic gene cluster, and a lidamycin synthetic gene cluster

Details

Language :
English
ISSN :
21601836
Volume :
9
Issue :
6
Database :
Directory of Open Access Journals
Journal :
G3: Genes, Genomes, Genetics
Publication Type :
Academic Journal
Accession number :
edsdoj.7327a867d6c0474f916bae694d50f910
Document Type :
article
Full Text :
https://doi.org/10.1534/g3.119.400037