Back to Search Start Over

GWAS and PheWAS of red blood cell components in a Northern Nevadan cohort.

GWAS and PheWAS of red blood cell components in a Northern Nevadan cohort.

Authors :
Robert W Read
Karen A Schlauch
Gai Elhanan
William J Metcalf
Anthony D Slonim
Ramsey Aweti
Robert Borkowski
Joseph J Grzymski
Source :
PLoS ONE, Vol 14, Iss 6, p e0218078 (2019)
Publication Year :
2019
Publisher :
Public Library of Science (PLoS), 2019.

Abstract

In this study, we perform a full genome-wide association study (GWAS) to identify statistically significantly associated single nucleotide polymorphisms (SNPs) with three red blood cell (RBC) components and follow it with two independent PheWASs to examine associations between phenotypic data (case-control status of diagnoses or disease), significant SNPs, and RBC component levels. We first identified associations between the three RBC components: mean platelet volume (MPV), mean corpuscular volume (MCV), and platelet counts (PC), and the genotypes of approximately 500,000 SNPs on the Illumina Infimum DNA Human OmniExpress-24 BeadChip using a single cohort of 4,673 Northern Nevadans. Twenty-one SNPs in five major genomic regions were found to be statistically significantly associated with MPV, two regions with MCV, and one region with PC, with p

Subjects

Subjects :
Medicine
Science

Details

Language :
English
ISSN :
19326203
Volume :
14
Issue :
6
Database :
Directory of Open Access Journals
Journal :
PLoS ONE
Publication Type :
Academic Journal
Accession number :
edsdoj.717983fbb5d04178926dbc72bf94ea82
Document Type :
article
Full Text :
https://doi.org/10.1371/journal.pone.0218078