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Developing novel liquid biopsy by selective capture of viral RNA on magnetic beads to detect COVID-19

Authors :
Mohammad Amin Kerachian
Saeid Amel JamehDar
Marjan Azghandi
Nasrin Keyvanlou
Sina Mazafffari Jovin
Ali Javadmanesh
Mahnaz Amini
Source :
Iranian Journal of Basic Medical Sciences, Vol 25, Iss 6, Pp 762-766 (2022)
Publication Year :
2022
Publisher :
Mashhad University of Medical Sciences, 2022.

Abstract

Objective(s): Early, specific, and sensitive detection methods of COVID-19 are essential for force stopping its worldwide infection. Although CT images of the lung and/or viral RNA extraction followed by real-time reverse-transcriptase-polymerase chain reaction (rRT-PCR) are widely used; they have some limitations. Here, we developed a highly sensitive magnetic bead-based viral RNA extraction assay followed by rRT-PCR. Materials and Methods: Case group included oropharyngeal/nasopharyngeal and blood samples from 30 patients diagnosed positive by PCR test for COVID-19 and control group included 30 same samples from COVID-19 negative PCR test individuals. RNA was extracted, using viral RNA extraction kit as well as using our hand-made capture bead-based technique. A one-step cDNA synthesis and Real Time PCR was conducted. A two-step comparison of the different viral RNA extraction methods for oropharyngeal/nasopharyngeal and blood samples was performed. Student t-test was applied with a P

Details

Language :
English
ISSN :
20083866 and 20083874
Volume :
25
Issue :
6
Database :
Directory of Open Access Journals
Journal :
Iranian Journal of Basic Medical Sciences
Publication Type :
Academic Journal
Accession number :
edsdoj.70977855654a4a9d9d1cba0a0807a0bf
Document Type :
article
Full Text :
https://doi.org/10.22038/ijbms.2022.65260.14379