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Protein–ligand binding with the coarse-grained Martini model

Authors :
Paulo C. T. Souza
Sebastian Thallmair
Paolo Conflitti
Carlos Ramírez-Palacios
Riccardo Alessandri
Stefano Raniolo
Vittorio Limongelli
Siewert J. Marrink
Source :
Nature Communications, Vol 11, Iss 1, Pp 1-11 (2020)
Publication Year :
2020
Publisher :
Nature Portfolio, 2020.

Abstract

Computer-aided design of protein-ligand binding is important for the development of novel drugs. Here authors present an approach to use the recently re-parametrized coarse-grained Martini model to perform unbiased millisecond sampling of protein-ligand binding interactions of small drug-like molecules.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
11
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.6fb80fd1c6c248a096931d38d50177ec
Document Type :
article
Full Text :
https://doi.org/10.1038/s41467-020-17437-5