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Curating genomic disease-gene relationships with Gene2Phenotype (G2P)

Authors :
T. Michael Yates
Morad Ansari
Louise Thompson
Sarah E. Hunt
Elena Cibrian Uhalte
Rachel J. Hobson
Joseph A. Marsh
Caroline F. Wright
Helen V. Firth
Source :
Genome Medicine, Vol 16, Iss 1, Pp 1-8 (2024)
Publication Year :
2024
Publisher :
BMC, 2024.

Abstract

Abstract Genetically determined disorders are highly heterogenous in clinical presentation and underlying molecular mechanism. The evidence underpinning these conditions in the peer-reviewed literature requires robust critical evaluation for diagnostic use. Here, we present a structured curation process for Gene2Phenotype (G2P). This draws on multiple lines of clinical, bioinformatic and functional evidence. The process utilises and extends existing terminologies, allows for precise definition of the molecular basis of disease, and confidence levels to be attributed to a given gene-disease assertion. In-depth disease curation using this process will prove useful in applications including in diagnostics, research and development of targeted therapeutics. G2P: www.ebi.ac.uk/gene2phenotype .

Details

Language :
English
ISSN :
1756994X
Volume :
16
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Genome Medicine
Publication Type :
Academic Journal
Accession number :
edsdoj.6d9b1086e44976b7f5f6692a8193e2
Document Type :
article
Full Text :
https://doi.org/10.1186/s13073-024-01398-1