Back to Search Start Over

Dataset of 313 metagenome-assemble genomes from streamer hot spring water

Authors :
Jia Hao Tan
Kok Jun Liew
Kian Mau Goh
Source :
Data in Brief, Vol 56, Iss , Pp 110829- (2024)
Publication Year :
2024
Publisher :
Elsevier, 2024.

Abstract

This data report presents prokaryotic metagenome-assembled genomes (MAGs) from a hot spring stream with temperatures between 64 and 100°C. The stream water was filtered and the extracted total DNA was sequenced using the Illumina HiSeq 2500 platform. Approximately 80 Gb of raw data were generated, which were subsequently assembled using MEGAHIT v1.2.9. The MAGs were generated using MetaWRAP with binning approaches of MetaBAT2, CONCOCT and MaxBin2. We constructed 25 medium-quality and 24 high-quality archaeal MAGs, and 152 medium-quality and 112 high-quality bacterial MAGs. The fasta files of these MAGs are available in the NCBI database as well as Mendeley Data. Major phyla identified include Bacteroidota, Chloroflexota, Desulfobacterota, Firmicutes, Patescibacteria, Proteobacteria, Spirochaetota, Verrucomicrobiota, Armatimonadota, Nitrospirota, Acidobacteriota, Elusimicrobiota, Planctomycetota, Candidate division WOR-3, Aquificota, Thermoproteota, and Micrarchaeota. This dataset is valuable for studies on thermophilic genomes, reconstruction of biochemical pathways and gene discovery.

Details

Language :
English
ISSN :
23523409
Volume :
56
Issue :
110829-
Database :
Directory of Open Access Journals
Journal :
Data in Brief
Publication Type :
Academic Journal
Accession number :
edsdoj.6d457a922bf54c2c8c19afe803de64d6
Document Type :
article
Full Text :
https://doi.org/10.1016/j.dib.2024.110829