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IMPACT OF GENETIC ANCESTRY ON THE DISTRIBUTION OF INTERFERON-λ4 RS12979860 POLYMORPHISM IN A GLOBAL POPULATION OF BUENOS AIRES, ARGENTINA
- Source :
- BAG. Journal of Basic and Applied Genetics, Vol 33, Iss 2, Pp 19-25 (2022)
- Publication Year :
- 2022
- Publisher :
- Sociedad Argentina de Genética, 2022.
-
Abstract
- Human interferon-λ4 is a cytokine involved in early stages of antiviral responses. Strikingly, some allelic variants with diminished antiviral activity reduce the susceptibility to viral infections, thus they would have suffered a positive selection pressure throughout the evolutionary history of the genus Homo. An intronic variant within the IFNλ4 locus (rs12979860, T˃C) emerged as one of the main gene determinants of the response to HCV and other viruses. The rs12979860-C allele has a differential frequency in African, European and Native American populations, though South American data are scarce. Here we characterize for the first time the distribution of rs12979860 genotypes in a sample of the global population of Buenos Aires, Argentina, assessing its association with European, Native American and African parental components. The rs12979860 genotypes were determined by PCR-RFLP in DNA samples from donors of a blood banks of Buenos Aires (n=96), whose genetic individual ancestry (European, African or Native American) had been previously determined using molecular markers. The distribution of rs12979860-CC, CT and TT was 29.17%, 50.0% and 20.83%, respectively. A significant increase in the frequency of CC among donors with a strong European contribution and a greater impact of the Native American component among donors carrying the T allele were observed. Native American and European components were associated to the rs12979860 distribution in a sample of the global population of Buenos Aires, while no differences were directly attributable to the African ancestry. Considering interferon´s key role in antiviral responses, our results may contribute to both bioanthropological and immunogenetic studies associated with infectious diseases.
- Subjects :
- buenos aires
ifnλ4 polymorphism
rs12979860 distribution
Genetics
QH426-470
Subjects
Details
- Language :
- English, Spanish; Castilian
- ISSN :
- 18526233
- Volume :
- 33
- Issue :
- 2
- Database :
- Directory of Open Access Journals
- Journal :
- BAG. Journal of Basic and Applied Genetics
- Publication Type :
- Academic Journal
- Accession number :
- edsdoj.6c51b9e8d0794d5f84b3179d15f05f43
- Document Type :
- article
- Full Text :
- https://doi.org/10.35407/bag.2022.33.02.02