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IMPACT OF GENETIC ANCESTRY ON THE DISTRIBUTION OF INTERFERON-λ4 RS12979860 POLYMORPHISM IN A GLOBAL POPULATION OF BUENOS AIRES, ARGENTINA

Authors :
Mansilla F.C.
Avena S.A.
Dejean C.B.
Turco C.S.
Capozzo A.V.
Source :
BAG. Journal of Basic and Applied Genetics, Vol 33, Iss 2, Pp 19-25 (2022)
Publication Year :
2022
Publisher :
Sociedad Argentina de Genética, 2022.

Abstract

Human interferon-λ4 is a cytokine involved in early stages of antiviral responses. Strikingly, some allelic variants with diminished antiviral activity reduce the susceptibility to viral infections, thus they would have suffered a positive selection pressure throughout the evolutionary history of the genus Homo. An intronic variant within the IFNλ4 locus (rs12979860, T˃C) emerged as one of the main gene determinants of the response to HCV and other viruses. The rs12979860-C allele has a differential frequency in African, European and Native American populations, though South American data are scarce. Here we characterize for the first time the distribution of rs12979860 genotypes in a sample of the global population of Buenos Aires, Argentina, assessing its association with European, Native American and African parental components. The rs12979860 genotypes were determined by PCR-RFLP in DNA samples from donors of a blood banks of Buenos Aires (n=96), whose genetic individual ancestry (European, African or Native American) had been previously determined using molecular markers. The distribution of rs12979860-CC, CT and TT was 29.17%, 50.0% and 20.83%, respectively. A significant increase in the frequency of CC among donors with a strong European contribution and a greater impact of the Native American component among donors carrying the T allele were observed. Native American and European components were associated to the rs12979860 distribution in a sample of the global population of Buenos Aires, while no differences were directly attributable to the African ancestry. Considering interferon´s key role in antiviral responses, our results may contribute to both bioanthropological and immunogenetic studies associated with infectious diseases.

Details

Language :
English, Spanish; Castilian
ISSN :
18526233
Volume :
33
Issue :
2
Database :
Directory of Open Access Journals
Journal :
BAG. Journal of Basic and Applied Genetics
Publication Type :
Academic Journal
Accession number :
edsdoj.6c51b9e8d0794d5f84b3179d15f05f43
Document Type :
article
Full Text :
https://doi.org/10.35407/bag.2022.33.02.02