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Chemical reactions regulated by phase-separated condensates

Authors :
Sudarshana Laha
Jonathan Bauermann
Frank Jülicher
Thomas C. T. Michaels
Christoph A. Weber
Source :
Physical Review Research, Vol 6, Iss 4, p 043092 (2024)
Publication Year :
2024
Publisher :
American Physical Society, 2024.

Abstract

Phase-separated liquid condensates can spatially organize and thereby regulate chemical processes. However, the physicochemical mechanisms underlying such regulation remain elusive as the intramolecular interactions responsible for phase separation give rise to a coupling between diffusion and chemical reactions at nondilute conditions. Here, we derive a theoretical framework that decouples the phase separation of scaffold molecules from the reaction kinetics of diluted clients. As a result, phase volume and client partitioning coefficients become control parameters, which enables us to dissect the impact of phase-separated condensates on chemical reactions. We apply this framework to two chemical processes and show how condensates affect the yield of reversible chemical reactions and the initial rate of a simple assembly process. In both cases, we find an optimal condensate volume at which the respective chemical reaction property is maximal. Our work can be applied to experimentally quantify how condensed phases alter chemical processes in systems biology and unravel the mechanisms of how biomolecular condensates regulate biochemistry in living cells.

Subjects

Subjects :
Physics
QC1-999

Details

Language :
English
ISSN :
26431564
Volume :
6
Issue :
4
Database :
Directory of Open Access Journals
Journal :
Physical Review Research
Publication Type :
Academic Journal
Accession number :
edsdoj.68ef165094d149bf8f4c9c8e87f1588d
Document Type :
article
Full Text :
https://doi.org/10.1103/PhysRevResearch.6.043092