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Prognostic prediction of systemic immune-inflammation status for patients with colorectal cancer: a novel pyroptosis-related model

Authors :
Jun Hu
Caijuan Tian
Yanpeng Zhao
Yixian Guo
Shuo Chen
Source :
World Journal of Surgical Oncology, Vol 20, Iss 1, Pp 1-13 (2022)
Publication Year :
2022
Publisher :
BMC, 2022.

Abstract

Abstract Pyroptosis and related gasdermin family proteins play an important role in the tumorigenesis of colorectal cancer (CRC). However, the prognostic roles of pyroptosis-related genes (PRGs) and their relation to infiltrates of immune cells in the pathogenesis of CRC remain unclear. Using this study, we set up a prognostic gene pattern on the basis of 13 PRGs (AIM2, CASP1, CASP5, CASP6, CASP8, CASP9, ELANE, GPX4, GSDMD, NLRP7, NOD2, PJVK, and PRKACA) for CRC patients. A comprehensive bioinformatics analysis based on these genes was then performed. With the good AUC prediction value of the ROC curves, the group with high hazard first had a poorer survival prognosis than the group with low hazard. Second, we found that PRGs were significantly related to inflammation-associated genes and immune-associated genes in CRC. Then, we identified a correlation of PRGs with immune infiltrations in CRC. For instance, the abundances of resting NK cells resting and neutrophils were higher in the low hazard group than in the high hazard group. Overall, this work indicated that PRGs contributed to generate heterogeneity of the tumor microenvironment (TME) in CRC. This prognostic PRG model may provide a starting point for the early diagnosis and medication use of CRC.

Details

Language :
English
ISSN :
14777819
Volume :
20
Issue :
1
Database :
Directory of Open Access Journals
Journal :
World Journal of Surgical Oncology
Publication Type :
Academic Journal
Accession number :
edsdoj.64a103b9df9b47c8948a84e8d35a2938
Document Type :
article
Full Text :
https://doi.org/10.1186/s12957-022-02697-w