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A de novo Genome of a Chinese Radish Cultivar
- Source :
- Horticultural Plant Journal, Vol 1, Iss 3, Pp 155-164 (2015)
- Publication Year :
- 2015
- Publisher :
- KeAi Communications Co., Ltd., 2015.
-
Abstract
- Here, we report a high-quality draft genome of a Chinese radish (Raphanus sativus) cultivar. This draft contains 387.73 Mb of assembled scaffolds, 83.93% of the scaffolds were anchored onto nine pseudochromosomes and 95.09% of 43 240 protein-coding genes were functionally annotated. 184.75 Mb (47.65%) of repeat sequences was identified in the assembled genome. By comparative analyses of the radish genome against 10 other plant genomes, 2 275 genes in 780 gene families were found unique to R. sativus. This genome is a good reference for genomic study and of great value for genetic improvement of radish.
- Subjects :
- Raphanus sativus
genome
sequencing
Plant culture
SB1-1110
Subjects
Details
- Language :
- English
- ISSN :
- 24680141 and 20959885
- Volume :
- 1
- Issue :
- 3
- Database :
- Directory of Open Access Journals
- Journal :
- Horticultural Plant Journal
- Publication Type :
- Academic Journal
- Accession number :
- edsdoj.5f94d8ebfe84b7ca9cc5e8b1bf0a2b9
- Document Type :
- article
- Full Text :
- https://doi.org/10.16420/j.issn.2095-9885.2016-0028