Back to Search Start Over

Data from collection and analysis of RNA sequencing data from pearl millet

Authors :
Kota Kambara
Shashi Kumar Gupta
Tetsuo Takano
Daisuke Tsugama
Source :
Data in Brief, Vol 55, Iss , Pp 110592- (2024)
Publication Year :
2024
Publisher :
Elsevier, 2024.

Abstract

Pearl millet (Pennisetum glaucum, also known as Cenchrus americanus) is a cereal crop that has a C4 photosynthesis system and that can grow and develop seeds even under stressed conditions including drought-stressed, high temperature-stressed and nutrient-poor conditions. In previous studies, transcriptomes of pearl millet were studied by RNA sequencing (RNA-Seq) to understand mechanisms regulating its development and tolerance to such stressed conditions. Here, RNA-Seq reads from 565 pearl millet samples from 25 projects in the NCBI (National Center for Biotechnology Information) BioProject database were collected and mapped to the pearl millet reference genome to obtain read counts and transcripts per million (TPM) for each pearl millet gene. The count and TPM data for all the 565 samples as well as the attributes of those samples and projects were deposited in the figshare repository (https://doi.org/10.6084/m9.figshare.24902100).

Details

Language :
English
ISSN :
23523409
Volume :
55
Issue :
110592-
Database :
Directory of Open Access Journals
Journal :
Data in Brief
Publication Type :
Academic Journal
Accession number :
edsdoj.5b7f225af0ba456482e2fad1d179384a
Document Type :
article
Full Text :
https://doi.org/10.1016/j.dib.2024.110592