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Loop-extrusion and polymer phase-separation can co-exist at the single-molecule level to shape chromatin folding

Authors :
Mattia Conte
Ehsan Irani
Andrea M. Chiariello
Alex Abraham
Simona Bianco
Andrea Esposito
Mario Nicodemi
Source :
Nature Communications, Vol 13, Iss 1, Pp 1-13 (2022)
Publication Year :
2022
Publisher :
Nature Portfolio, 2022.

Abstract

Two main mechanisms have been proposed to shape 3D genome architecture - loop extrusion and phase separation. Here the authors combine these mechanisms in polymer models in a manner that best fits 3D genome, based on both Hi-C and super-resolution locus imaging data, proposing that these two physical processes can indeed coexist simultaneously within cells to define loops and TADs.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
13
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.5970e283afc74da1b576894812c227e8
Document Type :
article
Full Text :
https://doi.org/10.1038/s41467-022-31856-6