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Ontology-based specification and generation of search queries for post-market surveillance

Authors :
Alexandr Uciteli
Stefan Kropf
Timo Weiland
Stefanie Meese
Klaus Graef
Sabrina Rohrer
Marc O. Schurr
Wolfram Bartussek
Christoph Goller
Philipp Blohm
Robin Seidel
Christian Bayer
Manuel Kernenbach
Kathrin Pfeiffer
Wolfgang Lauer
Jörg-Uwe Meyer
Michael Witte
Heinrich Herre
Source :
Journal of Biomedical Semantics, Vol 10, Iss 1, Pp 1-13 (2019)
Publication Year :
2019
Publisher :
BMC, 2019.

Abstract

Abstract Background The vigilant observation of medical devices during post-market surveillance (PMS) for identifying safety-relevant incidents is a non-trivial task. A wide range of sources has to be monitored in order to integrate all accessible data about the safety and performance of a medical device. PMS needs to be supported by an efficient search strategy and the possibility to create complex search queries by domain experts. Results We use ontologies to support the specification of search queries and the preparation of the document corpus, which contains all relevant documents. In this paper, we present (1) the Search Ontology (SON) v2.0, (2) an Excel template for specifying search queries, and (3) the Search Ontology Generator (SONG), which generates complex queries out of the Excel template. Based on our approach, a service-oriented architecture was designed, which supports and assists domain experts during PMS. Comprehensive testing confirmed the correct execution of all SONG functions. The applicability of our method and of the developed tools was evaluated by domain experts. The test persons concordantly rated our solution after a short period of training as highly user-friendly, intuitive and well applicable for supporting PMS. Conclusions The Search Ontology is a promising domain-independent approach to specify complex search queries. Our solution allows advanced searches for relevant documents in different domains using suitable domain ontologies.

Details

Language :
English
ISSN :
20411480
Volume :
10
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Journal of Biomedical Semantics
Publication Type :
Academic Journal
Accession number :
edsdoj.4d76656bea594d23b6a4a6ded6d8a057
Document Type :
article
Full Text :
https://doi.org/10.1186/s13326-019-0203-7