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Isolation and Characterization of Microsatellite Markers for Shorea platyclados (Dipterocarpaceae)

Authors :
Chin Hong Ng
Chai Ting Lee
Soon Leong Lee
Lee Hong Tnah
Kevin Kit Siong Ng
Source :
Applications in Plant Sciences, Vol 1, Iss 7, p 1200538 (2013)
Publication Year :
2013
Publisher :
Wiley, 2013.

Abstract

Premise of the study: Microsatellite markers were isolated and characterized in Shorea platyclados (Dipterocarpaceae) for DNA profiling and genetic diversity assessment of this tropical timber species. Methods and Results: Fifteen polymorphic microsatellite loci were developed and characterized in S. platyclados using a genomic library enriched for dinucleotide (CT) repeats. The primers amplified dinucleotide repeats with 3–14 alleles per locus across four natural populations. The observed and expected heterozygosities ranged from 0.292 to 1.000 and from 0.301 to 0.894, respectively. No significant deviation from Hardy–Weinberg equilibrium was detected in the 15 loci. Four loci pairs displayed linkage disequilibrium. Conclusions: These highly polymorphic markers are adequate for DNA profiling and studies of population genetics in S. platyclados.

Details

Language :
English
ISSN :
21680450
Volume :
1
Issue :
7
Database :
Directory of Open Access Journals
Journal :
Applications in Plant Sciences
Publication Type :
Academic Journal
Accession number :
edsdoj.48c784ebbcbf4ed59f5aec335a0ed7c5
Document Type :
article
Full Text :
https://doi.org/10.3732/apps.1200538