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Identification of Drought-Resistant Genes in Shanlan Upland Rice

Authors :
Xiaoling Niu
Nanxin Zhai
Xinsen Yang
Meng Su
Caiyue Liu
Liu Wang
Pengzheng Qu
Wuge Liu
Qianhua Yuan
Xinwu Pei
Source :
Agriculture, Vol 12, Iss 2, p 150 (2022)
Publication Year :
2022
Publisher :
MDPI AG, 2022.

Abstract

Shanlan upland rice is a kind of upland rice and is suitable for planting in the mountains and in hilly terrain. It is mainly found in China’s Hainan province. To discover the drought-resistant genes in Shanlan upland rice, two representative varieties—Baishanuo (BSN) and Dongfang Manpoxiang (MPX)—were selected for transcriptome sequencing, after which gene expression analysis was used to confirm their gene expression patterns. The results demonstrated that 2791 and 829 differentially expressed genes (DEGs) were identified for each variety, including 184 and 58 transcriptional factors, respectively. Expression analysis demonstrated that some genes with unknown functions, such as Os10g0505900, were highly expressed under drought stress treatment. The transcriptomic data and digital gene expression profiling data obtained in this study provide a basis for studying the drought-resistant mechanism in Shanlan upland rice.

Details

Language :
English
ISSN :
20770472
Volume :
12
Issue :
2
Database :
Directory of Open Access Journals
Journal :
Agriculture
Publication Type :
Academic Journal
Accession number :
edsdoj.483f8d1863834e86bdf4008b40fb7d26
Document Type :
article
Full Text :
https://doi.org/10.3390/agriculture12020150